register functions automatically

Author: njzjz

dpdata/plugins/abacus.py

@@ -3,7 +3,7 @@
 
 
 @Format.register("abacus/scf")
-@Format.register_from("from_abacus_pw_scf")
+@Format.register("abacus/pw/scf")
 class AbacusSCFFormat(Format):
     @Format.post("rot_lower_triangular")
     def from_labeled_system(self, file_name, **kwargs):

dpdata/plugins/amber.py

@@ -4,7 +4,6 @@
 
 
 @Format.register("amber/md")
-@Format.register_from("from_amber_md")
 class AmberMDFormat(Format):
     def from_system(self, file_name=None, parm7_file=None, nc_file=None, use_element_symbols=None):
         # assume the prefix is the same if the spefic name is not given
@@ -30,7 +29,6 @@ def from_labeled_system(self, file_name=None, parm7_file=None, nc_file=None, mdf
 
 
 @Format.register("sqm/out")
-@Format.register_from("from_sqm_out")
 class SQMOutFormat(Format):
     def from_system(self, fname, **kwargs):
         '''

dpdata/plugins/ase.py

@@ -2,7 +2,6 @@
 
 
 @Format.register("ase/structure")
-@Format.register_to("to_ase_structure")
 class ASEStructureFormat(Format):
     def to_system(self, data, **kwargs):
         '''

dpdata/plugins/cp2k.py

@@ -5,7 +5,6 @@
 
 
 @Format.register("cp2k/aimd_output")
-@Format.register_from("from_cp2k_aimd_output")
 class CP2KAIMDOutputFormat(Format):
     def from_labeled_system(self, file_name, restart=False, **kwargs):
         xyz_file = sorted(glob.glob("{}/*pos*.xyz".format(file_name)))[0]
@@ -14,7 +13,6 @@ def from_labeled_system(self, file_name, restart=False, **kwargs):
 
 
 @Format.register("cp2k/output")
-@Format.register_from("from_cp2k_output")
 class CP2KOutputFormat(Format):
     def from_labeled_system(self, file_name, restart=False, **kwargs):
         data = {}

dpdata/plugins/deepmd.py

@@ -6,8 +6,6 @@
 
 @Format.register("deepmd")
 @Format.register("deepmd/raw")
-@Format.register_from("from_deepmd_raw")
-@Format.register_to("to_deepmd_raw")
 class DeePMDRawFormat(Format):
     def from_system(self, file_name, type_map=None, **kwargs):
         return dpdata.deepmd.raw.to_system_data(file_name, type_map=type_map, labels=False)
@@ -24,10 +22,7 @@ def from_labeled_system(self, file_name, type_map, **kwargs):
 
 
 @Format.register("deepmd/npy")
-@Format.register_from("from_deepmd_comp")
-@Format.register_from("from_deepmd_npy")
-@Format.register_to("to_deepmd_comp")
-@Format.register_to("to_deepmd_npy")
+@Format.register("deepmd/comp")
 class DeePMDCompFormat(Format):
     def from_system(self, file_name, type_map=None, **kwargs):
         return dpdata.deepmd.comp.to_system_data(file_name, type_map=type_map, labels=False)

dpdata/plugins/fhi_aims.py

@@ -2,7 +2,7 @@
 from dpdata.format import Format
 
 @Format.register("fhi_aims/md")
-@Format.register_from("from_fhi_aims_output")
+@Format.register("fhi_aims/output")
 class FhiMDFormat(Format):
     def from_labeled_system(self, file_name, md=True, begin = 0, step = 1, **kwargs):
         data = {}
@@ -20,7 +20,6 @@ def from_labeled_system(self, file_name, md=True, begin = 0, step = 1, **kwargs)
         return data
 
 @Format.register("fhi_aims/scf")
-@Format.register_from("from_fhi_aims_output")
 class FhiSCFFormat(Format):
     def from_labeled_system(self, file_name, **kwargs):
         data = {}

dpdata/plugins/gaussian.py

@@ -3,7 +3,6 @@
 
 
 @Format.register("gaussian/log")
-@Format.register_from("from_gaussian_log")
 class GaussianLogFormat(Format):
     def from_labeled_system(self, file_name, md=False, **kwargs):
         try:
@@ -17,7 +16,6 @@ def from_labeled_system(self, file_name, md=False, **kwargs):
 
 
 @Format.register("gaussian/md")
-@Format.register_from("from_gaussian_md")
 class GaussianMDFormat(Format):
     def from_labeled_system(self, file_name, **kwargs):
         return GaussianLogFormat().from_labeled_system(file_name, md=True)

dpdata/plugins/gromacs.py

@@ -4,8 +4,6 @@
 
 @Format.register("gro")
 @Format.register("gromacs/gro")
-@Format.register_from("from_gromacs_gro")
-@Format.register_to("to_gromacs_gro")
 class PwmatOutputFormat(Format):
     def from_system(self, file_name, format_atom_name=True, **kwargs):
         """

dpdata/plugins/lammps.py

@@ -5,8 +5,6 @@
 
 @Format.register("lmp")
 @Format.register("lammps/lmp")
-@Format.register_from("from_lammps_lmp")
-@Format.register_to("to_lammps_lmp")
 class LAMMPSLmpFormat(Format):
     @Format.post("shift_orig_zero")
     def from_system(self, file_name, type_map=None, **kwargs):
@@ -35,8 +33,6 @@ def to_system(self, data, file_name, frame_idx=0, **kwargs):
 
 @Format.register("dump")
 @Format.register("lammps/dump")
-@Format.register_from("from_lammps_dump")
-@Format.register_to("to_lammps_dump")
 class LAMMPSDumpFormat(Format):
     @Format.post("shift_orig_zero")
     def from_system(self,

dpdata/plugins/list.py

@@ -2,7 +2,6 @@
 
 
 @Format.register("list")
-@Format.register_to("to_list")
 class ListFormat(Format):
     def to_system(self, data, **kwargs):
         """