[pre-commit.ci] pre-commit autoupdate (#2235)

<!--pre-commit.ci start-->
updates:
- [github.com/pre-commit/pre-commit-hooks: v4.6.0 →
v5.0.0](pre-commit/pre-commit-hooks@v4.6.0...v5.0.0)
- [github.com/astral-sh/ruff-pre-commit: v0.4.4 →
v0.8.4](astral-sh/ruff-pre-commit@v0.4.4...v0.8.4)
- [github.com/tox-dev/tox-ini-fmt: 1.3.1 →
1.4.1](tox-dev/tox-ini-fmt@1.3.1...1.4.1)
- [github.com/pre-commit/mirrors-clang-format: v18.1.5 →
v19.1.5](pre-commit/mirrors-clang-format@v18.1.5...v19.1.5)
- [github.com/MarcoGorelli/cython-lint: v0.16.2 →
v0.16.6](MarcoGorelli/cython-lint@v0.16.2...v0.16.6)
<!--pre-commit.ci end-->

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Jinzhe Zeng <jinzhe.zeng@rutgers.edu>

Author: pre-commit-ci[bot]

.pre-commit-config.yaml

@@ -3,7 +3,7 @@
 exclude: ^reacnetgenerator/static/webpack/\.yarn/releases/.*$
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.6.0
+    rev: v5.0.0
     hooks:
       - id: trailing-whitespace
       - id: end-of-file-fixer
@@ -17,15 +17,15 @@ repos:
       - id: mixed-line-ending
   # Python
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.4.4
+    rev: v0.8.4
     hooks:
       - id: ruff
         args: ["--fix"]
         types_or: [python, pyi, jupyter]
       - id: ruff-format
         types_or: [python, pyi, jupyter]
   - repo: https://github.com/tox-dev/tox-ini-fmt
-    rev: "1.3.1"
+    rev: "1.4.1"
     hooks:
       - id: tox-ini-fmt
   # numpydoc
@@ -36,12 +36,14 @@ repos:
         args: ["--write"]
   # C++
   - repo: https://github.com/pre-commit/mirrors-clang-format
-    rev: v18.1.5
+    rev: v19.1.5
     hooks:
       - id: clang-format
+        exclude: \.ipynb$
+
   # Cython
   - repo: https://github.com/MarcoGorelli/cython-lint
-    rev: v0.16.2
+    rev: v0.16.6
     hooks:
       - id: cython-lint
       - id: double-quote-cython-strings

docs/conf.py

@@ -20,7 +20,7 @@
 # -- Project information -----------------------------------------------------
 
 project = "ReacNetGenerator"
-copyright = "2019-%d, DeepModeling" % datetime.now().year
+copyright = f"2019-{datetime.now().year}, DeepModeling"
 author = "Jinzhe Zeng"
 
 # The full version, including alpha/beta/rc tags