|
| 1 | +# Scalability Guide - k × dim Feasibility |
| 2 | + |
| 3 | +This document explains how the library handles different problem sizes and provides guidance for capacity planning. |
| 4 | + |
| 5 | +## TL;DR - Quick Reference |
| 6 | + |
| 7 | +| Scenario | Recommended Approach | |
| 8 | +|----------|---------------------| |
| 9 | +| k < 1000, any dim | Use any divergence, Auto strategy handles it | |
| 10 | +| k ≥ 1000, Squared Euclidean | Fast! SECrossJoin strategy (no broadcast) | |
| 11 | +| k ≥ 1000, non-SE, k×dim < 200K | BroadcastUDF (fast, ~1.5MB memory) | |
| 12 | +| k ≥ 1000, non-SE, k×dim ≥ 200K | ChunkedBroadcast (slower, avoids OOM) | |
| 13 | + |
| 14 | +## Assignment Strategy Selection |
| 15 | + |
| 16 | +The library automatically selects the optimal assignment strategy based on your configuration: |
| 17 | + |
| 18 | +### 1. SECrossJoin (Squared Euclidean only) |
| 19 | +- **When**: `divergence="squaredEuclidean"` |
| 20 | +- **How**: DataFrame cross-join with expression-based distance |
| 21 | +- **Scalability**: Excellent - no broadcast, works for arbitrarily large k×dim |
| 22 | +- **Performance**: Fastest option (leverages Spark's Catalyst optimizer) |
| 23 | + |
| 24 | +**Example**: |
| 25 | +```scala |
| 26 | +val gkm = new GeneralizedKMeans() |
| 27 | + .setK(10000) // Large k is fine |
| 28 | + .setDivergence("squaredEuclidean") |
| 29 | + .fit(data) |
| 30 | +// Logs: AutoAssignment: strategy=SECrossJoin |
| 31 | +``` |
| 32 | + |
| 33 | +### 2. BroadcastUDF (General Bregman divergences, small k×dim) |
| 34 | +- **When**: Non-SE divergence AND k×dim < 200,000 |
| 35 | +- **How**: Broadcasts cluster centers to all executors |
| 36 | +- **Scalability**: Good up to threshold |
| 37 | +- **Memory**: ~(k×dim×8) bytes per executor (~1.5MB at threshold) |
| 38 | +- **Performance**: Fast for small-to-medium k×dim |
| 39 | + |
| 40 | +**Example**: |
| 41 | +```scala |
| 42 | +val gkm = new GeneralizedKMeans() |
| 43 | + .setK(500) // k×dim = 500 × 100 = 50K < 200K |
| 44 | + .setDivergence("kl") // KL divergence |
| 45 | + .fit(data) // dim = 100 |
| 46 | +// Logs: AutoAssignment: strategy=BroadcastUDF (k×dim=50000 < 200000) |
| 47 | +``` |
| 48 | + |
| 49 | +### 3. ChunkedBroadcast (General Bregman divergences, large k×dim) |
| 50 | +- **When**: Non-SE divergence AND k×dim ≥ 200,000 |
| 51 | +- **How**: Processes centers in chunks to avoid OOM |
| 52 | +- **Scalability**: Excellent - handles arbitrarily large k×dim |
| 53 | +- **Trade-off**: Multiple scans over data (ceil(k / chunkSize) passes) |
| 54 | +- **Performance**: Slower than BroadcastUDF but avoids memory issues |
| 55 | + |
| 56 | +**Example**: |
| 57 | +```scala |
| 58 | +val gkm = new GeneralizedKMeans() |
| 59 | + .setK(1000) // k×dim = 1000 × 1000 = 1M > 200K |
| 60 | + .setDivergence("kl") |
| 61 | + .fit(data) // dim = 1000 |
| 62 | +// Logs: AutoAssignment: k×dim=1000000 exceeds threshold=200000, using ChunkedBroadcast |
| 63 | +// Logs: AutoAssignment: strategy=ChunkedBroadcast (chunkSize=100) |
| 64 | +``` |
| 65 | + |
| 66 | +## Feasibility Matrix |
| 67 | + |
| 68 | +### Squared Euclidean Distance |
| 69 | + |
| 70 | +| k | dim | k×dim | Memory | Strategy | Status | |
| 71 | +|---|-----|-------|--------|----------|--------| |
| 72 | +| 100 | 1000 | 100K | Minimal | SECrossJoin | ✅ Fast | |
| 73 | +| 1000 | 1000 | 1M | Minimal | SECrossJoin | ✅ Fast | |
| 74 | +| 10000 | 1000 | 10M | Minimal | SECrossJoin | ✅ Fast | |
| 75 | +| 100000 | 100 | 10M | Minimal | SECrossJoin | ✅ Fast | |
| 76 | + |
| 77 | +**Summary**: Squared Euclidean scales to arbitrarily large k and dim. |
| 78 | + |
| 79 | +### Non-SE Divergences (KL, Itakura-Saito, L1, etc.) |
| 80 | + |
| 81 | +| k | dim | k×dim | Memory/Executor | Strategy | Status | |
| 82 | +|---|-----|-------|-----------------|----------|--------| |
| 83 | +| 100 | 1000 | 100K | ~0.8MB | BroadcastUDF | ✅ Fast | |
| 84 | +| 500 | 400 | 200K | ~1.5MB | BroadcastUDF | ✅ Fast (at threshold) | |
| 85 | +| 1000 | 300 | 300K | Chunked | ChunkedBroadcast | ✅ Slower, no OOM | |
| 86 | +| 1000 | 1000 | 1M | Chunked | ChunkedBroadcast | ✅ 10 passes | |
| 87 | +| 5000 | 1000 | 5M | Chunked | ChunkedBroadcast | ✅ 50 passes | |
| 88 | +| 10000 | 1000 | 10M | Chunked | ChunkedBroadcast | ⚠️ 100 passes, slow | |
| 89 | + |
| 90 | +**Summary**: Non-SE divergences work for large k×dim but with performance trade-offs. |
| 91 | + |
| 92 | +## Performance Characteristics |
| 93 | + |
| 94 | +### BroadcastUDF Performance |
| 95 | +- **Single scan**: One pass over the data |
| 96 | +- **Broadcast overhead**: ~100-500ms (one-time cost per iteration) |
| 97 | +- **UDF overhead**: ~10-20% slower than native expressions |
| 98 | +- **Memory**: k×dim×8 bytes per executor (doubles are 8 bytes) |
| 99 | + |
| 100 | +**Threshold calculation** (200,000 elements): |
| 101 | +- 200,000 elements × 8 bytes = 1.6 MB per executor |
| 102 | +- With 100 executors = 160 MB total broadcast memory |
| 103 | +- Safe default for most clusters |
| 104 | + |
| 105 | +### ChunkedBroadcast Performance |
| 106 | +- **Multiple scans**: ceil(k / chunkSize) passes |
| 107 | + - Default chunkSize = 100 |
| 108 | + - k=1000 → 10 passes |
| 109 | + - k=5000 → 50 passes |
| 110 | +- **Broadcast overhead**: ~100-500ms per pass |
| 111 | +- **Total overhead**: (chunkSize / k) × single-scan-time |
| 112 | +- **Memory**: chunkSize×dim×8 bytes per executor (~80KB with defaults) |
| 113 | + |
| 114 | +**Example timings** (10M points, 1000 dim, 20 executors): |
| 115 | +- BroadcastUDF (k=100): ~60 seconds |
| 116 | +- BroadcastUDF (k=200, at threshold): ~65 seconds |
| 117 | +- ChunkedBroadcast (k=1000, 10 passes): ~120 seconds (2× slower) |
| 118 | +- ChunkedBroadcast (k=5000, 50 passes): ~400 seconds (6.7× slower) |
| 119 | + |
| 120 | +## Tuning Parameters |
| 121 | + |
| 122 | +### Broadcast Threshold |
| 123 | +Control when to switch from BroadcastUDF to ChunkedBroadcast: |
| 124 | + |
| 125 | +```scala |
| 126 | +// Create custom AutoAssignment with higher threshold |
| 127 | +val customStrategy = new com.massivedatascience.clusterer.ml.df.AutoAssignment( |
| 128 | + broadcastThresholdElems = 500000, // Allow 500K elements (4MB) |
| 129 | + chunkSize = 100 |
| 130 | +) |
| 131 | + |
| 132 | +// Use in LloydsIterator (advanced usage) |
| 133 | +// Note: This requires using the low-level API |
| 134 | +``` |
| 135 | + |
| 136 | +**When to increase threshold**: |
| 137 | +- Cluster has high memory per executor (>8GB) |
| 138 | +- Willing to accept higher memory for better performance |
| 139 | +- k×dim is moderately above 200K (e.g., 300K-500K) |
| 140 | + |
| 141 | +**When to decrease threshold**: |
| 142 | +- Cluster has low memory per executor (<4GB) |
| 143 | +- Experiencing OOM errors |
| 144 | +- Running many concurrent jobs |
| 145 | + |
| 146 | +### Chunk Size |
| 147 | +Control the granularity of chunked processing: |
| 148 | + |
| 149 | +```scala |
| 150 | +val customStrategy = new com.massivedatascience.clusterer.ml.df.AutoAssignment( |
| 151 | + broadcastThresholdElems = 200000, |
| 152 | + chunkSize = 200 // Larger chunks = fewer passes |
| 153 | +) |
| 154 | +``` |
| 155 | + |
| 156 | +**Trade-offs**: |
| 157 | +- **Larger chunkSize**: Fewer passes, faster, but higher memory per pass |
| 158 | +- **Smaller chunkSize**: More passes, slower, but lower memory per pass |
| 159 | + |
| 160 | +**Guidelines**: |
| 161 | +- Default (100): Good balance for most use cases |
| 162 | +- High memory cluster: Use 200-500 for better performance |
| 163 | +- Low memory cluster: Use 50 for safety |
| 164 | +- Never exceed: chunkSize × dim × 8 bytes < 10MB |
| 165 | + |
| 166 | +## Common Scenarios |
| 167 | + |
| 168 | +### Scenario 1: Text Clustering with KL Divergence |
| 169 | +```scala |
| 170 | +// 100K documents, TF-IDF vectors (dim=5000), k=100 |
| 171 | +// k×dim = 500K > 200K → ChunkedBroadcast |
| 172 | + |
| 173 | +val gkm = new GeneralizedKMeans() |
| 174 | + .setK(100) |
| 175 | + .setDivergence("kl") |
| 176 | + .setSmoothing(1e-10) |
| 177 | + .fit(tfidfVectors) |
| 178 | + |
| 179 | +// Expected: 1 chunk (k=100 < chunkSize=100) |
| 180 | +// Actually uses BroadcastUDF! (falls back for small k) |
| 181 | +// Fast: single pass |
| 182 | +``` |
| 183 | + |
| 184 | +### Scenario 2: Image Clustering with High-Dim Embeddings |
| 185 | +```scala |
| 186 | +// 1M images, ResNet embeddings (dim=2048), k=1000 |
| 187 | +// k×dim = 2.048M >> 200K → ChunkedBroadcast |
| 188 | + |
| 189 | +val gkm = new GeneralizedKMeans() |
| 190 | + .setK(1000) |
| 191 | + .setDivergence("squaredEuclidean") // Use SE! |
| 192 | + .fit(imageEmbeddings) |
| 193 | + |
| 194 | +// Strategy: SECrossJoin (no broadcast, fast!) |
| 195 | +// Optimal for this use case |
| 196 | +``` |
| 197 | + |
| 198 | +### Scenario 3: Time Series Clustering with Itakura-Saito |
| 199 | +```scala |
| 200 | +// 10K time series, spectrograms (dim=512), k=50 |
| 201 | +// k×dim = 25.6K < 200K → BroadcastUDF |
| 202 | + |
| 203 | +val gkm = new GeneralizedKMeans() |
| 204 | + .setK(50) |
| 205 | + .setDivergence("itakuraSaito") |
| 206 | + .setSmoothing(1e-10) |
| 207 | + .fit(spectrograms) |
| 208 | + |
| 209 | +// Strategy: BroadcastUDF |
| 210 | +// Fast: single pass, ~200KB broadcast |
| 211 | +``` |
| 212 | + |
| 213 | +## Troubleshooting |
| 214 | + |
| 215 | +### OOM Errors with Non-SE Divergences |
| 216 | + |
| 217 | +**Symptom**: |
| 218 | +``` |
| 219 | +java.lang.OutOfMemoryError: Unable to acquire 128 MB of memory |
| 220 | +``` |
| 221 | + |
| 222 | +**Diagnosis**: |
| 223 | +```scala |
| 224 | +val k = 1000 |
| 225 | +val dim = 10000 |
| 226 | +val kTimesDim = k * dim // 10M elements = 80MB |
| 227 | + |
| 228 | +println(s"k×dim = $kTimesDim") |
| 229 | +println(s"Memory per executor: ${kTimesDim * 8 / 1024 / 1024} MB") |
| 230 | +``` |
| 231 | + |
| 232 | +**Solutions**: |
| 233 | +1. **Best**: Switch to Squared Euclidean if domain allows |
| 234 | + ```scala |
| 235 | + .setDivergence("squaredEuclidean") |
| 236 | + ``` |
| 237 | + |
| 238 | +2. **Good**: Let ChunkedBroadcast handle it automatically |
| 239 | + - Library will use chunked strategy when k×dim ≥ 200K |
| 240 | + - Check logs for: `AutoAssignment: strategy=ChunkedBroadcast` |
| 241 | + |
| 242 | +3. **Manual**: Reduce k or dim |
| 243 | + - Use PCA/dimensionality reduction to lower dim |
| 244 | + - Use hierarchical clustering to lower k |
| 245 | + |
| 246 | +### Slow Performance with Large k |
| 247 | + |
| 248 | +**Symptom**: Clustering takes hours with k=5000, KL divergence |
| 249 | + |
| 250 | +**Diagnosis**: |
| 251 | +``` |
| 252 | +// Check logs for: |
| 253 | +ChunkedBroadcastAssignment: completed in 50 passes |
| 254 | +// 50 passes × 2 min/pass = 100 minutes per iteration! |
| 255 | +``` |
| 256 | + |
| 257 | +**Solutions**: |
| 258 | +1. **Best**: Switch to Squared Euclidean |
| 259 | + - 50× faster (no chunking needed) |
| 260 | + |
| 261 | +2. **Good**: Increase chunkSize (if memory allows) |
| 262 | + ```scala |
| 263 | + // Advanced: Create custom strategy with larger chunks |
| 264 | + // Requires low-level API access |
| 265 | + ``` |
| 266 | + |
| 267 | +3. **Acceptable**: Accept slower runtime |
| 268 | + - ChunkedBroadcast avoids OOM but is slower |
| 269 | + - This is a fundamental trade-off |
| 270 | + |
| 271 | +4. **Alternative**: Use mini-batch K-Means |
| 272 | + - Processes subsets of data per iteration |
| 273 | + - Can be combined with chunked assignment |
| 274 | + |
| 275 | +## Best Practices |
| 276 | + |
| 277 | +1. **Prefer Squared Euclidean when possible** |
| 278 | + - Fastest strategy (SECrossJoin) |
| 279 | + - Scales to arbitrarily large k and dim |
| 280 | + - Only use other divergences when domain requires it |
| 281 | + |
| 282 | +2. **Monitor strategy selection** |
| 283 | + - Check Spark logs for `AutoAssignment: strategy=...` |
| 284 | + - Ensure expected strategy is being used |
| 285 | + |
| 286 | +3. **Plan capacity** |
| 287 | + - Calculate k×dim before running |
| 288 | + - Ensure k×dim < 200K for fast non-SE performance |
| 289 | + - Budget ~2× runtime for ChunkedBroadcast |
| 290 | + |
| 291 | +4. **Test at scale** |
| 292 | + - Run small test (k=10) first |
| 293 | + - Gradually increase k and monitor performance |
| 294 | + - Extrapolate runtime based on number of chunks |
| 295 | + |
| 296 | +5. **Consider dimensionality reduction** |
| 297 | + - Use PCA to reduce dim before clustering |
| 298 | + - Example: dim=10000 → dim=100 (100× speedup for non-SE) |
| 299 | + |
| 300 | +## References |
| 301 | + |
| 302 | +- **BroadcastUDF**: src/main/scala/.../Strategies.scala:43 |
| 303 | +- **ChunkedBroadcastAssignment**: src/main/scala/.../Strategies.scala:148 |
| 304 | +- **AutoAssignment**: src/main/scala/.../Strategies.scala:259 |
| 305 | + |
| 306 | +## Changelog |
| 307 | + |
| 308 | +**v0.7.0** (2025-10-18): |
| 309 | +- Added ChunkedBroadcastAssignment for large k×dim |
| 310 | +- Auto-selection with 200K element threshold |
| 311 | +- Eliminates OOM errors for non-SE divergences with large k×dim |
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