Merge pull request #16 from Ann-Holmes/patch-1

mbernste · web-flow · commit 7d375810a0d3 · 2022-04-02T10:34:15.000-04:00
Fix bug: _combine_by_cluster
diff --git a/cello/cello.py b/cello/cello.py
@@ -426,7 +426,7 @@ def _raw_probabilities(
                 """.format(clust_key)
             )
 
-        ad_clust = _combine_by_cluster(ad)
+        ad_clust = _combine_by_cluster(ad, clust_key=clust_key)
         # If there's only one cluster, expand dimensions of expression
         # matrix. AnnData shrinks it, so we need to keep it as a Numpy
         # array.

Original file line number	Diff line number	Diff line change
`@@ -426,7 +426,7 @@ def _raw_probabilities(`
`426`	`426`	`""".format(clust_key)`
`427`	`427`	`)`
`428`	`428`
`429`		`- ad_clust = _combine_by_cluster(ad)`
	`429`	`+ ad_clust = _combine_by_cluster(ad, clust_key=clust_key)`
`430`	`430`	`# If there's only one cluster, expand dimensions of expression`
`431`	`431`	`# matrix. AnnData shrinks it, so we need to keep it as a Numpy`
`432`	`432`	`# array.`