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update generated tutorial data (master)
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tutorial_data/master/betalactamase/dials.find_spots.log

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DIALS 3.dev.1271-gd77d5dad1
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The following parameters have been modified:
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spotfinder {

tutorial_data/master/betalactamase/dials.import.log

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input {

tutorial_data/master/betalactamase/dials.index.log

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input {

tutorial_data/master/betalactamase/dials.integrate.log

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integration {
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mp {
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Timing information for reference profile formation
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+-------------------+---------------+
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| Read time | 64.71 seconds |
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| Extract time | 0.52 seconds |
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| Pre-process time | 0.11 seconds |
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| Process time | 29.58 seconds |
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| Read time | 66.93 seconds |
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| Extract time | 0.43 seconds |
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| Pre-process time | 0.12 seconds |
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| Process time | 29.26 seconds |
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| Post-process time | 0.00 seconds |
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| Total time | 95.15 seconds |
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| Total time | 96.93 seconds |
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+-------------------+---------------+
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================================================================================
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Timing information for integration
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+-------------------+----------------+
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| Read time | 58.85 seconds |
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| Extract time | 2.83 seconds |
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| Pre-process time | 0.46 seconds |
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| Process time | 145.83 seconds |
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| Read time | 58.10 seconds |
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| Extract time | 2.78 seconds |
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| Pre-process time | 0.47 seconds |
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| Process time | 147.58 seconds |
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| Post-process time | 0.00 seconds |
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| Total time | 208.92 seconds |
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| Total time | 209.83 seconds |
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+-------------------+----------------+
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Removing 41623 unintegrated reflections of 368701 total

tutorial_data/master/betalactamase/dials.refine.log

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input {

tutorial_data/master/betalactamase/dials.refine_bravais_settings.log

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input {

tutorial_data/master/betalactamase/dials.reindex.log

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change_of_basis_op = "a+b,-a+b,c"

tutorial_data/master/betalactamase/dials.scale.log

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input {
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experiments = symmetrized.expt
@@ -67,7 +67,7 @@ Completed preprocessing and initialisation for this dataset.
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Components to be refined in this cycle for all datasets: scale, decay, absorption
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Performing a round of scaling with an LBFGS minimizer.
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Time taken for refinement 3.56
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Time taken for refinement 3.53
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+--------+--------+----------+
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Components to be refined in this cycle for all datasets: scale, decay, absorption
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Performing a round of scaling with an LBFGS minimizer.
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Time taken for refinement 1.02
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Time taken for refinement 0.99
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+--------+--------+----------+
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Components to be refined in this cycle for all datasets: scale, decay, absorption
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Performing a round of scaling with a Levenberg-Marquardt minimizer.
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Time taken for refinement 3.53
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Time taken for refinement 3.56
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Refinement steps:
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+--------+--------+----------+
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Components to be refined in this cycle for all datasets: scale, decay, absorption
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Performing a round of scaling with a Levenberg-Marquardt minimizer.
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Time taken for refinement 1.11
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Time taken for refinement 1.12
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Refinement steps:
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+--------+--------+----------+
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The reflection table variances have been adjusted to account for the
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Total time taken: 18.6707s
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Total time taken: 18.5379s
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================================================================================
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tutorial_data/master/betalactamase/dials.scale_cut.log

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cut_data {
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d_min = 1.4
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Components to be refined in this cycle for all datasets: scale, decay, absorption
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Performing a round of scaling with an LBFGS minimizer.
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Time taken for refinement 0.98
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Time taken for refinement 0.99
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+--------+--------+----------+
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Components to be refined in this cycle for all datasets: scale, decay, absorption
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Performing a round of scaling with an LBFGS minimizer.
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Time taken for refinement 0.66
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Time taken for refinement 0.67
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+--------+--------+----------+
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Components to be refined in this cycle for all datasets: scale, decay, absorption
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Performing a round of scaling with a Levenberg-Marquardt minimizer.
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Time taken for refinement 2.31
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Time taken for refinement 2.34
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+--------+--------+----------+
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Performing a round of scaling with a Levenberg-Marquardt minimizer.
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Time taken for refinement 1.10
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Time taken for refinement 1.12
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The reflection table variances have been adjusted to account for the
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Total time taken: 13.1401s
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Total time taken: 13.1383s
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================================================================================
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tutorial_data/master/betalactamase/dials.symmetry.log

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input {

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