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incorporate manual into deploying docs (#198)
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‎doc/manual/extractEquations.py‎

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# constants
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rc = {
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"directory": "images", # output directory
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"directory": "../source/images", # output directory
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"resolution": 72, # equation images resolution
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"eqns": [], # list of raw equation codes
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"tmpdir": None, # temporary directory

‎doc/manual/fixHTMLCode.py‎

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# constants
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rc = {
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"directory": "images", # directory with equation images
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"directory": "../source/images", # directory with equation images
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}
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eqmark = "<!-- EquationMark -->"

doc/manual/pdfgui.html renamed to doc/manual/html/pdfgui.html

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‎doc/manual/html/readme.txt‎

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This directory need to be relativly the same as doc/build/html/manual from
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doc/source/_static/images

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