.env.test.local.example

# Test configuration for utah_organoids
# Copy this file to .env.test.local and customize for your environment
# The .env.test.local file is loaded by tests/conftest.py before running tests

# RAW_ROOT_DATA_DIR: Where to find test data files
# This should point to the root directory containing patch-clamp session folders
# Expected structure: {RAW_ROOT_DATA_DIR}/patch_clamp/{experiment}/{experiment}/
#
# If not set, falls back to system temp directory (integration tests will be skipped)
RAW_ROOT_DATA_DIR=

# PROCESSED_ROOT_DATA_DIR: Where to write test outputs
# If not set, falls back to system temp directory
PROCESSED_ROOT_DATA_DIR=

# Database prefix for test databases
DATABASE_PREFIX=test_utah_organoids_

# DataJoint connection settings (optional - testcontainers will provide defaults)
# Only set these if you want to use external MySQL instead of testcontainers
# DJ_HOST=localhost
# DJ_USER=root
# DJ_PASS=test_password
# DJ_PORT=3306

# Use external MySQL container instead of testcontainers (optional)
# Set to 1 if you're manually running docker-compose for MySQL
# DJ_USE_EXTERNAL_CONTAINERS=1