Fixed uninitialized and unused variables.

Author: dobrienphd

include/particlezoo/IAEA/IAEAHeader.h

@@ -731,13 +731,13 @@ namespace ParticleZoo::IAEAphspFile
             bool                wIsStored_;
             bool                weightIsStored_;
 
-            float               constantX_;
-            float               constantY_;
-            float               constantZ_;
-            float               constantU_;
-            float               constantV_;
-            float               constantW_;
-            float               constantWeight_;
+            float               constantX_{};
+            float               constantY_{};
+            float               constantZ_{};
+            float               constantU_{};
+            float               constantV_{};
+            float               constantW_{};
+            float               constantWeight_{};
 
             std::vector<EXTRA_FLOAT_TYPE> extraFloatData_;
             std::vector<EXTRA_LONG_TYPE> extraLongData_;

include/particlezoo/parallel/HistoryBalancedParallelReader.h

@@ -171,7 +171,6 @@ namespace ParticleZoo {
             std::vector<std::shared_ptr<PhaseSpaceFileReader>> readers_;
 
             bool hasGapsBetweenHistories_;
-            std::uint64_t totalHistoriesToRead_;
             std::uint64_t numberOfOriginalHistories_;
             std::uint64_t numberOfParticlesInPhsp_;
             std::uint64_t numberOfRepresentedHistories_;

src/PhaseSpaceFileWriter.cc

@@ -44,7 +44,10 @@ namespace ParticleZoo
       historiesToAccountFor_(0),
       buffer_(BUFFER_SIZE),
       writeParticleDepth_(0),
-      fixedValues_(fixedValues)
+      fixedValues_(fixedValues),
+      flipXDirection_(false),
+      flipYDirection_(false),
+      flipZDirection_(false)
     {
         if (formatType != FormatType::NONE && !file_.is_open())
         {

src/egs/egsphspFile.cc

@@ -145,7 +145,7 @@ namespace ParticleZoo::EGSphspFile
 
     // Writer class implementation
     Writer::Writer(const std::string & fileName, const UserOptions & options)
-    : PhaseSpaceFileWriter("EGS", fileName, options)
+    : PhaseSpaceFileWriter("EGS", fileName, options), latchOption_(EGSLATCHOPTION::LATCH_OPTION_2)
     {
         mode_ = EGSMODE::MODE0; // Default mode, MODE2 requires source particles to include ZLAST information
 
@@ -160,6 +160,23 @@ namespace ParticleZoo::EGSphspFile
                 throw std::runtime_error("Unsupported EGS phase-space file mode: " + modeStr);
             }
         }
+
+        if (options.contains(EGSLATCHOptionCommand)) {
+            int latchOptionInt = options.extractIntOption(EGSLATCHOptionCommand);
+            switch (latchOptionInt) {
+                case 1:
+                    latchOption_ = EGSLATCHOPTION::LATCH_OPTION_1;
+                    break;
+                case 2:
+                    latchOption_ = EGSLATCHOPTION::LATCH_OPTION_2;
+                    break;
+                case 3:
+                    latchOption_ = EGSLATCHOPTION::LATCH_OPTION_3;
+                    break;
+                default:
+                    throw std::runtime_error("Unsupported EGS LATCH option: " + std::to_string(latchOptionInt));
+            }
+        }        
     }
 
     std::vector<CLICommand> Writer::getFormatSpecificCLICommands() {

src/parallel/HistoryBalancedParallelReader.cc

@@ -47,9 +47,6 @@ namespace ParticleZoo {
 
         // Get the number of original histories and adjust totalHistoriesToRead_ if necessary
         numberOfOriginalHistories_ = readers_[0]->getNumberOfOriginalHistories();
-        if (numberOfOriginalHistories_ < totalHistoriesToRead_) {
-            totalHistoriesToRead_ = numberOfOriginalHistories_;
-        }
 
         // Get the number of particles in the phase space
         numberOfParticlesInPhsp_ = readers_[0]->getNumberOfParticles();