biomisc/NAMESPACE at master · dswatson/biomisc · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
# Generated by roxygen2: do not edit by hand

export(PAC)
export(check_resid)
export(eigengenes)
export(lcpm)
export(qmod)
export(qn.bmiq)
export(voom_txi)
import(ChAMPdata)
import(dplyr)
import(ggplot2)
import(qusage)
importFrom(ChAMP,champ.load)
importFrom(DESeq2,DESeqDataSetFromTximport)
importFrom(DESeq2,assays)
importFrom(DESeq2,counts)
importFrom(DESeq2,estimateSizeFactors)
importFrom(DESeq2,normalizationFactors)
importFrom(DESeq2,results)
importFrom(bioplotr,plot_mv)
importFrom(edgeR,DGEList)
importFrom(edgeR,calcNormFactors)
importFrom(edgeR,cpm)
importFrom(impute,impute.knn)
importFrom(limma,arrayWeights)
importFrom(limma,eBayes)
importFrom(limma,getEAWP)
importFrom(limma,lmFit)
importFrom(limma,normalizeBetweenArrays)
importFrom(limma,voom)
importFrom(lumi,importMethyIDAT)
importFrom(lumi,lumiMethyB)
importFrom(lumi,lumiMethyC)
importFrom(lumi,lumiMethyN)
importFrom(purrr,map_lgl)
importFrom(tidyr,gather)
importFrom(wateRmelon,BMIQ)