Combine books (#21)

* add gitignore, precommit

* add nbs

* update actions only when push to main

* nb changes + intro changes

* nb + background changes

* add data

* tutorial 1 nb, backgroud, appendix updates

* updates to first two nbs

* remvoe duplicated section

* add learning objectives

* reorg

* small change to pc nb

* tutorial 1 intro edits

* fix typos

* use pixi for multiplatform environment

* add spellcheck task

* better rendering of notebook admonitions

* hacky but effective notebook spellcheck

* aiohttp needed to open itslive url  with xarray

* add linkcheck task

* itslive notebooks also need geoviews and pyarrow

* xvec needed by 5_itslive

* rich needed in sentinel1 notebook

* wording changes

* tutorial2 edits and change dir structure

* metadata wrangle nb and other changes

* s1 nb updates

* book updates

* rename itslive_tools

* rough draft conclusion files

* add vector data

* clear nb outputs

* remove s1 nb6

* add gitignore, ch1 data, update repo url in config

* remove bbox coord not needed

* add to other resources

* intro conclusion edits + s1 comparison updates

* add intro pgs

* remove notes

---------

Co-authored-by: Scott Henderson <scottyhq@gmail.com>

Author: e-marshall

.binder/environment.yml

@@ -0,0 +1,25 @@
+name: book
+channels:
+- conda-forge
+- nodefaults
+dependencies:
+- jupyter-book >=1,<2
+- codespell >=2.4.1,<3
+- cf_xarray >=0.10.0,<0.11
+- contextily >=1.6.2,<2
+- geopandas >=1.0.1,<2
+- hvplot >=0.11.2,<0.12
+- jupyterlab >=4.3.5,<5
+- matplotlib-base >=3.10.0,<4
+- numpy >=2.2.3,<3
+- pandas >=2.2.3,<3
+- planetary-computer >=1.0.0,<2
+- pystac >=1.12.1,<2
+- pystac-client >=0.8.6,<0.9
+- requests >=2.32.3,<3
+- rioxarray >=0.18.2,<0.19
+- scipy >=1.15.2,<2
+- stackstac >=0.5.1,<0.6
+- xarray >=2025.1.2,<2026
+- zarr <3
+- jupyterlab-myst >=2.4.2,<3

.github/workflows/draft-pdf.yml

@@ -1,5 +1,8 @@
 name: Draft PDF
-on: [push]
+on: 
+  push:
+    branches:
+      - main
 
 jobs:
   paper:

.gitignore

@@ -0,0 +1,300 @@
+# Jupyterbook
+_build 
+_static 
+
+#Data 
+tutorial2/data/full_timeseries/asf_rtcs
+tutorial2/data/full_timeseries/intermediate_cubes/s1_pc_cube.zarr
+tutorial2/data/subset_timeseries/asf_rtcs
+
+#Extra nbs
+tutorial2/subste_nbs
+
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+_build
+awscli-bundle
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build
+examples/_build
+jupyter_book/book_template/_build
+docs/conf.py
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+.python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# VSCode config
+.vscode
+
+# PyCharm config
+.idea
+
+# OSX# Jupyterbook
+_build 
+_static 
+
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+_build
+awscli-bundle
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build
+examples/_build
+jupyter_book/book_template/_build
+docs/conf.py
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+.python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# VSCode config
+.vscode
+
+# PyCharm config
+.idea
+
+# OSX
+.DS_Store

.pre-commit-config.yaml

@@ -0,0 +1,13 @@
+
+repos:
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.9.6
+    hooks:
+      - id: ruff
+      - id: ruff-format
+
+  - repo: https://github.com/nbQA-dev/nbQA
+    rev: 1.9.1  # Check latest version
+    hooks:
+      - id: nbqa-ruff
+        args: ["format"]