diff --git a/.github/workflows/charts_tests.yml b/.github/workflows/charts_tests.yml new file mode 100644 index 00000000..bd1ef28e --- /dev/null +++ b/.github/workflows/charts_tests.yml @@ -0,0 +1,40 @@ +name: Test Python SDK + +on: + workflow_call: + +permissions: + contents: read + +jobs: + publish: + defaults: + run: + working-directory: ./chart_data_extractor + name: Build and test Chart Data Extractor + runs-on: ubuntu-20.04 + steps: + - name: Checkout repository + uses: actions/checkout@v3 + + - name: Set up Python + uses: actions/setup-python@v4 + with: + python-version: '3.10' + + - name: Install and configure Poetry + uses: snok/install-poetry@v1 + with: + version: 1.5.1 + virtualenvs-create: true + virtualenvs-in-project: true + installer-parallel: true + + - name: Install dependencies + run: poetry install + + - name: Test build + run: poetry build + + - name: Run tests + run: poetry run pytest --verbose -x diff --git a/.github/workflows/pr.yml b/.github/workflows/pr.yml index 3de134d8..40c3251b 100644 --- a/.github/workflows/pr.yml +++ b/.github/workflows/pr.yml @@ -12,6 +12,7 @@ jobs: outputs: python: ${{ steps.filter.outputs.python }} js: ${{ steps.filter.outputs.js }} + charts: ${{ steps.filter.outputs.charts }} steps: - name: Checkout repository uses: actions/checkout@v3 @@ -38,6 +39,8 @@ jobs: - 'python/**' js: - 'js/**' + charts: + - 'chart_data_extractor/**' python-tests: needs: [ changes ] @@ -52,3 +55,11 @@ jobs: if: needs.changes.outputs.js == 'true' uses: ./.github/workflows/js_tests.yml secrets: inherit + + charts-tests: + needs: [ changes ] + name: Tests Chart package + # If the PR does not have the label 'js-rc', the code is already tested in the prerelease workflow + if: needs.changes.outputs.charts == 'true' && !contains( github.event.pull_request.labels.*.name, 'charts-rc') + uses: ./.github/workflows/charts_tests.yml + secrets: inherit diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 5876b58c..c2e4d7a0 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -56,6 +56,8 @@ jobs: outputs: js: ${{ steps.filter.outputs.js }} python: ${{ steps.filter.outputs.python }} + charts: ${{ steps.filter.outputs.charts }} + template: ${{ steps.filter.outputs.template }} steps: - name: Checkout repository uses: actions/checkout@v3 @@ -79,27 +81,147 @@ jobs: base: ${{ steps.last_release.outputs.tag_name }} filters: | js: - - 'js/**' + - 'js/src/**' python: - - 'python/**' + - 'python/e2b_code_interpreter/**' + charts: + - 'chart_data_extractor/e2b_charts/**' + template: + - 'template/**' + + charts-tests: + name: Charts tests + needs: [changes] + if: needs.changes.outputs.charts == 'true' + uses: ./.github/workflows/charts_tests.yml + + charts-release: + name: Charts release + needs: [charts-tests] + if: needs.changes.outputs.charts == 'true' + runs-on: ubuntu-latest + steps: + - name: Checkout Repo + uses: actions/checkout@v3 + + - name: Install pnpm + uses: pnpm/action-setup@v3 + id: pnpm-install + with: + version: 9.5 + + - name: Set up Python + uses: actions/setup-python@v4 + with: + python-version: '3.10' + + - name: Install and configure Poetry + uses: snok/install-poetry@v1 + with: + version: 1.5.1 + virtualenvs-create: true + virtualenvs-in-project: true + installer-parallel: true + + - name: Configure pnpm + run: | + pnpm config set auto-install-peers true + pnpm config set exclude-links-from-lockfile true + + - name: Install dependencies + run: pnpm install --frozen-lockfile + + - name: Create new versions + run: pnpm run version + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + + - name: Release new versions + run: | + poetry build + poetry config pypi-token.pypi ${PYPI_TOKEN} + poetry publish --skip-existing + working-directory: ./chart_data_extractor + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + PYPI_TOKEN: ${{ secrets.CHARTS_PYPI_TOKEN }} + + + build-docker-image: + name: Build Docker Image + runs-on: ubuntu-latest + needs: [changes, charts-release] + if: needs.changes.outputs.template == 'true' || needs.changes.outputs.charts == 'true' + steps: + - name: Checkout repository + uses: actions/checkout@v3 + with: + fetch-depth: 0 + + - name: Set up Docker Buildx + uses: docker/setup-buildx-action@v3 + + - name: Log in to DockerHub + uses: docker/login-action@v3 + with: + username: ${{ secrets.DOCKERHUB_USERNAME }} + password: ${{ secrets.DOCKERHUB_TOKEN }} + + - name: Build and push to DockerHub + working-directory: ./template + run: | + docker pull ${{ secrets.DOCKERHUB_USERNAME }}/code-interpreter:latest || true + docker buildx build \ + --file Dockerfile \ + --platform linux/amd64 \ + --push \ + --tag ${{ secrets.DOCKERHUB_USERNAME }}/code-interpreter:latest . + + build-template: + name: Build E2B template + runs-on: ubuntu-latest + needs: [build-docker-image] + if: needs.changes.outputs.template == 'true' || needs.changes.outputs.charts == 'true' + steps: + - name: Checkout repository + uses: actions/checkout@v3 + with: + fetch-depth: 0 + - name: Install E2B CLI + run: npm install -g @e2b/cli + + - name: Build e2b + run: e2b template build + working-directory: ./template + env: + E2B_ACCESS_TOKEN: ${{ secrets.E2B_ACCESS_TOKEN }} python-tests: name: Python Tests - needs: [changes] - if: needs.changes.outputs.python == 'true' + needs: [changes, build-template] + if: always() && + !contains(needs.*.result, 'failure') && + !contains(needs.*.result, 'cancelled') && + (needs.changes.outputs.python == 'true' || needs.changes.outputs.template == 'true') uses: ./.github/workflows/python_tests.yml secrets: inherit js-tests: name: JS Tests - needs: [changes] - if: needs.changes.outputs.js == 'true' + needs: [changes, build-template] + if: always() && + !contains(needs.*.result, 'failure') && + !contains(needs.*.result, 'cancelled') && + (needs.changes.outputs.js == 'true' || needs.changes.outputs.template == 'true') uses: ./.github/workflows/js_tests.yml secrets: inherit release: needs: [python-tests, js-tests] - if: (!cancelled()) && !contains(needs.*.result, 'failure') && needs.is_release.outputs.release == 'true' + if: always() && + !contains(needs.*.result, 'failure') && + !contains(needs.*.result, 'cancelled') && + (needs.changes.outputs.js == 'true' || needs.changes.outputs.python == 'true') name: Release runs-on: ubuntu-latest steps: diff --git a/.github/workflows/template.yml b/.github/workflows/template.yml deleted file mode 100644 index 4540b257..00000000 --- a/.github/workflows/template.yml +++ /dev/null @@ -1,50 +0,0 @@ -name: Build and push Code Interpreter template - -on: - push: - paths: - - 'template/**' - - '.github/workflows/template.yml' - branches: - - main - -permissions: - contents: read - -jobs: - buildAndPublish: - defaults: - run: - working-directory: ./template - - name: Build and Push Images - runs-on: ubuntu-20.04 - steps: - - name: Checkout repository - uses: actions/checkout@v3 - - - name: Set up Docker Buildx - uses: docker/setup-buildx-action@v3 - - - name: Log in to DockerHub - uses: docker/login-action@v3 - with: - username: ${{ secrets.DOCKERHUB_USERNAME }} - password: ${{ secrets.DOCKERHUB_TOKEN }} - - - name: Build and push to DockerHub - run: | - docker pull ${{ secrets.DOCKERHUB_USERNAME }}/code-interpreter:latest || true - docker buildx build \ - --file Dockerfile \ - --platform linux/amd64 \ - --push \ - --tag ${{ secrets.DOCKERHUB_USERNAME }}/code-interpreter:latest . - - - name: Install E2B CLI - run: npm install -g @e2b/cli - - - name: Build e2b - run: e2b template build - env: - E2B_ACCESS_TOKEN: ${{ secrets.E2B_ACCESS_TOKEN }} diff --git a/chart_data_extractor/README.md b/chart_data_extractor/README.md new file mode 100644 index 00000000..7c23e47f --- /dev/null +++ b/chart_data_extractor/README.md @@ -0,0 +1,3 @@ +# Extracting Data for Code Interpreter SDK + +This package is a utility used to extract data in the Code Interpreter SDK from, e.g., DataFrames and matplotlib plots. diff --git a/chart_data_extractor/e2b_charts/__init__.py b/chart_data_extractor/e2b_charts/__init__.py new file mode 100644 index 00000000..3dbdc8fa --- /dev/null +++ b/chart_data_extractor/e2b_charts/__init__.py @@ -0,0 +1 @@ +from .main import graph_figure_to_graph diff --git a/chart_data_extractor/e2b_charts/graphs/__init__.py b/chart_data_extractor/e2b_charts/graphs/__init__.py new file mode 100644 index 00000000..f9914582 --- /dev/null +++ b/chart_data_extractor/e2b_charts/graphs/__init__.py @@ -0,0 +1,4 @@ +from .base import GraphType, Graph +from .bars import BarGraph, BoxAndWhiskerGraph +from .pie import PieGraph +from .planar import ScatterGraph, LineGraph diff --git a/chart_data_extractor/e2b_charts/graphs/bars.py b/chart_data_extractor/e2b_charts/graphs/bars.py new file mode 100644 index 00000000..9949333e --- /dev/null +++ b/chart_data_extractor/e2b_charts/graphs/bars.py @@ -0,0 +1,141 @@ +from typing import Literal, List + +from matplotlib.axes import Axes +from pydantic import BaseModel, Field + +from .base import Graph2D, GraphType +from ..utils.rounding import dynamic_round + + +class BarData(BaseModel): + label: str + group: str + value: float + + +class BarGraph(Graph2D): + type: Literal[GraphType.BAR] = GraphType.BAR + + elements: List[BarData] = Field(default_factory=list) + + def _extract_info(self, ax: Axes) -> None: + super()._extract_info(ax) + for container in ax.containers: + group_label = container.get_label() + if group_label.startswith("_container"): + number = int(group_label[10:]) + group_label = f"Group {number}" + + heights = [rect.get_height() for rect in container] + if all(height == heights[0] for height in heights): + # vertical bars + self._change_orientation() + labels = [label.get_text() for label in ax.get_yticklabels()] + values = [rect.get_width() for rect in container] + else: + # horizontal bars + labels = [label.get_text() for label in ax.get_xticklabels()] + values = heights + for label, value in zip(labels, values): + + bar = BarData(label=label, value=value, group=group_label) + self.elements.append(bar) + + +class BoxAndWhiskerData(BaseModel): + label: str + min: float + first_quartile: float + median: float + third_quartile: float + max: float + outliers: List[float] + + +class BoxAndWhiskerGraph(Graph2D): + type: Literal[GraphType.BOX_AND_WHISKER] = GraphType.BOX_AND_WHISKER + + elements: List[BoxAndWhiskerData] = Field(default_factory=list) + + def _extract_info(self, ax: Axes) -> None: + super()._extract_info(ax) + labels = [item.get_text() for item in ax.get_xticklabels()] + + boxes = [] + for label, box in zip(labels, ax.patches): + vertices = box.get_path().vertices + x_vertices = [dynamic_round(x) for x in vertices[:, 0]] + y_vertices = [dynamic_round(y) for y in vertices[:, 1]] + x = min(x_vertices) + y = min(y_vertices) + boxes.append( + { + "x": x, + "y": y, + "label": label, + "width": max(x_vertices) - x, + "height": max(y_vertices) - y, + "outliers": [], + } + ) + + orientation = "horizontal" + if all(box["height"] == boxes[0]["height"] for box in boxes): + orientation = "vertical" + + if orientation == "vertical": + self._change_orientation() + for box in boxes: + box["x"], box["y"] = box["y"], box["x"] + box["width"], box["height"] = box["height"], box["width"] + + for i, line in enumerate(ax.lines): + xdata = [dynamic_round(x) for x in line.get_xdata()] + ydata = [dynamic_round(y) for y in line.get_ydata()] + + if orientation == "vertical": + xdata, ydata = ydata, xdata + + if len(xdata) == 1: + for box in boxes: + if box["x"] <= xdata[0] <= box["x"] + box["width"]: + break + else: + continue + + box["outliers"].append(ydata[0]) + if len(ydata) != 2: + continue + for box in boxes: + if box["x"] <= xdata[0] <= xdata[1] <= box["x"] + box["width"]: + break + else: + continue + + if ( + # Check if the line is inside the box, prevent floating point errors + ydata[0] == ydata[1] + and box["y"] <= ydata[0] <= box["y"] + box["height"] + ): + box["median"] = ydata[0] + continue + + lower_value = min(ydata) + upper_value = max(ydata) + if upper_value == box["y"]: + box["whisker_lower"] = lower_value + elif lower_value == box["y"] + box["height"]: + box["whisker_upper"] = upper_value + + self.elements = [ + BoxAndWhiskerData( + label=box["label"], + min=box["whisker_lower"], + first_quartile=box["y"], + median=box["median"], + third_quartile=box["y"] + box["height"], + max=box["whisker_upper"], + outliers=box["outliers"], + ) + for box in boxes + ] diff --git a/chart_data_extractor/e2b_charts/graphs/base.py b/chart_data_extractor/e2b_charts/graphs/base.py new file mode 100644 index 00000000..2dbc1afe --- /dev/null +++ b/chart_data_extractor/e2b_charts/graphs/base.py @@ -0,0 +1,75 @@ +import enum +import re +from typing import Optional, List, Any + +from matplotlib.axes import Axes +from pydantic import BaseModel, Field + + +class GraphType(str, enum.Enum): + LINE = "line" + SCATTER = "scatter" + BAR = "bar" + PIE = "pie" + BOX_AND_WHISKER = "box_and_whisker" + SUPERGRAPH = "supergraph" + UNKNOWN = "unknown" + + +class Graph(BaseModel): + type: GraphType + title: Optional[str] = None + + elements: List[Any] = Field(default_factory=list) + + def __init__(self, ax: Optional[Axes] = None, **kwargs): + super().__init__(**kwargs) + if ax: + self._extract_info(ax) + + def _extract_info(self, ax: Axes) -> None: + """ + Function to extract information for Graph + """ + title = ax.get_title() + if title == "": + title = None + + self.title = title + + +class Graph2D(Graph): + x_label: Optional[str] = None + y_label: Optional[str] = None + x_unit: Optional[str] = None + y_unit: Optional[str] = None + + def _extract_info(self, ax: Axes) -> None: + """ + Function to extract information for Graph2D + """ + super()._extract_info(ax) + x_label = ax.get_xlabel() + if x_label == "": + x_label = None + self.x_label = x_label + + y_label = ax.get_ylabel() + if y_label == "": + y_label = None + self.y_label = y_label + + regex = r"\s\((.*?)\)|\[(.*?)\]" + if self.x_label: + match = re.search(regex, self.x_label) + if match: + self.x_unit = match.group(1) or match.group(2) + + if self.y_label: + match = re.search(regex, self.y_label) + if match: + self.y_unit = match.group(1) or match.group(2) + + def _change_orientation(self): + self.x_label, self.y_label = self.y_label, self.x_label + self.x_unit, self.y_unit = self.y_unit, self.x_unit diff --git a/chart_data_extractor/e2b_charts/graphs/pie.py b/chart_data_extractor/e2b_charts/graphs/pie.py new file mode 100644 index 00000000..e3039ab9 --- /dev/null +++ b/chart_data_extractor/e2b_charts/graphs/pie.py @@ -0,0 +1,32 @@ +from decimal import Decimal +from typing import Literal, List + +from matplotlib.axes import Axes +from pydantic import BaseModel, Field + +from .base import Graph, GraphType +from ..utils.rounding import dynamic_round + + +class PieData(BaseModel): + label: str + angle: float + radius: float + + +class PieGraph(Graph): + type: Literal[GraphType.PIE] = GraphType.PIE + + elements: List[PieData] = Field(default_factory=list) + + def _extract_info(self, ax: Axes) -> None: + super()._extract_info(ax) + + for wedge in ax.patches: + pie_data = PieData( + label=wedge.get_label(), + angle=abs(dynamic_round(Decimal(wedge.theta2) - Decimal(wedge.theta1))), + radius=wedge.r, + ) + + self.elements.append(pie_data) diff --git a/chart_data_extractor/e2b_charts/graphs/planar.py b/chart_data_extractor/e2b_charts/graphs/planar.py new file mode 100644 index 00000000..9753629b --- /dev/null +++ b/chart_data_extractor/e2b_charts/graphs/planar.py @@ -0,0 +1,132 @@ +from datetime import date +from typing import List, Tuple, Union, Sequence, Any, Literal + +import matplotlib +import numpy +from matplotlib.axes import Axes +from matplotlib.dates import _SwitchableDateConverter +from pydantic import BaseModel, field_validator, Field + +from .base import Graph2D, GraphType +from ..utils import is_grid_line + + +class PointData(BaseModel): + label: str + points: List[Tuple[Union[str, float], Union[str, float]]] + + @field_validator("points", mode="before") + @classmethod + def transform_points( + cls, value + ) -> List[Tuple[Union[str, float], Union[str, float]]]: + parsed_value = [] + for x, y in value: + x = cls._parse_point(x) + y = cls._parse_point(y) + parsed_value.append((x, y)) + return parsed_value + + @staticmethod + def _parse_point(point): + if isinstance(point, date): + return point.isoformat() + if isinstance(point, numpy.datetime64): + return point.astype("datetime64[s]").astype(str) + return point + + +class PointGraph(Graph2D): + x_ticks: List[Union[str, float]] = Field(default_factory=list) + x_tick_labels: List[str] = Field(default_factory=list) + x_scale: str = Field(default="linear") + + y_ticks: List[Union[str, float]] = Field(default_factory=list) + y_tick_labels: List[str] = Field(default_factory=list) + y_scale: str = Field(default="linear") + + elements: List[PointData] = Field(default_factory=list) + + def _extract_info(self, ax: Axes) -> None: + """ + Function to extract information for PointGraph + """ + super()._extract_info(ax) + + self.x_tick_labels = [label.get_text() for label in ax.get_xticklabels()] + + x_ticks = ax.get_xticks() + self.x_ticks = self._extract_ticks_info(ax.xaxis.converter, x_ticks) + self.x_scale = self._detect_scale( + ax.xaxis.converter, ax.get_xscale(), self.x_ticks, self.x_tick_labels + ) + + self.y_tick_labels = [label.get_text() for label in ax.get_yticklabels()] + self.y_ticks = self._extract_ticks_info(ax.yaxis.converter, ax.get_yticks()) + self.y_scale = self._detect_scale( + ax.yaxis.converter, ax.get_yscale(), self.y_ticks, self.y_tick_labels + ) + + @staticmethod + def _detect_scale(converter, scale: str, ticks: Sequence, labels: Sequence) -> str: + # If the converter is a date converter, it's a datetime scale + if isinstance(converter, _SwitchableDateConverter): + return "datetime" + + # If the scale is not linear, it can't be categorical + if scale != "linear": + return scale + + # If all the ticks are integers and are in order from 0 to n-1 + # and the labels aren't corresponding to the ticks, it's categorical + for i, tick_and_label in enumerate(zip(ticks, labels)): + tick, label = tick_and_label + if isinstance(tick, (int, float)) and tick == i and str(i) != label: + continue + # Found a tick, which wouldn't be in a categorical scale + return "linear" + + return "categorical" + + @staticmethod + def _extract_ticks_info(converter: Any, ticks: Sequence) -> list: + if isinstance(converter, _SwitchableDateConverter): + return [matplotlib.dates.num2date(tick).isoformat() for tick in ticks] + else: + example_tick = ticks[0] + + if isinstance(example_tick, (int, float)): + return [float(tick) for tick in ticks] + else: + return list(ticks) + + +class LineGraph(PointGraph): + type: Literal[GraphType.LINE] = GraphType.LINE + + def _extract_info(self, ax: Axes) -> None: + super()._extract_info(ax) + + for line in ax.get_lines(): + if is_grid_line(line): + continue + label = line.get_label() + if label.startswith("_child"): + number = int(label[6:]) + label = f"Line {number}" + + points = [(x, y) for x, y in zip(line.get_xdata(), line.get_ydata())] + line_data = PointData(label=label, points=points) + self.elements.append(line_data) + + +class ScatterGraph(PointGraph): + type: Literal[GraphType.SCATTER] = GraphType.SCATTER + + def _extract_info(self, ax: Axes) -> None: + super()._extract_info(ax) + + for collection in ax.collections: + points = [(x, y) for x, y in collection.get_offsets()] + scatter_data = PointData(label=collection.get_label(), points=points) + self.elements.append(scatter_data) diff --git a/chart_data_extractor/e2b_charts/main.py b/chart_data_extractor/e2b_charts/main.py new file mode 100644 index 00000000..2642525e --- /dev/null +++ b/chart_data_extractor/e2b_charts/main.py @@ -0,0 +1,111 @@ +from typing import Optional, List, Literal + +from matplotlib.axes import Axes +from matplotlib.collections import PathCollection +from matplotlib.lines import Line2D +from matplotlib.patches import Rectangle, Wedge, PathPatch +from matplotlib.pyplot import Figure + +from matplotlib.text import Text +from pydantic import Field + +from .graphs import ( + GraphType, + Graph, + LineGraph, + BarGraph, + BoxAndWhiskerGraph, + PieGraph, + ScatterGraph, +) +from .utils.filtering import is_grid_line + + +class SuperGraph(Graph): + type: Literal[GraphType.SUPERGRAPH] = GraphType.SUPERGRAPH + elements: List[ + LineGraph | ScatterGraph | BarGraph | PieGraph | BoxAndWhiskerGraph + ] = Field(default_factory=list) + + def __init__(self, figure: Figure): + title = figure.get_suptitle() + super().__init__(title=title) + + self.elements = [get_graph_from_ax(ax) for ax in figure.axes] + + +def _get_type_of_graph(ax: Axes) -> GraphType: + objects = list(filter(lambda obj: not isinstance(obj, Text), ax._children)) + + # Check for Line plots + if all(isinstance(line, Line2D) for line in objects): + return GraphType.LINE + + if all(isinstance(box_or_path, (PathPatch, Line2D)) for box_or_path in objects): + return GraphType.BOX_AND_WHISKER + + filtered = [] + for obj in objects: + if isinstance(obj, Line2D) and is_grid_line(obj): + continue + filtered.append(obj) + + objects = filtered + + # Check for Scatter plots + if all(isinstance(path, PathCollection) for path in objects): + return GraphType.SCATTER + + # Check for Pie plots + if all(isinstance(artist, Wedge) for artist in objects): + return GraphType.PIE + + # Check for Bar plots + if all(isinstance(rect, Rectangle) for rect in objects): + return GraphType.BAR + + return GraphType.UNKNOWN + + +def get_graph_from_ax( + ax: Axes, +) -> LineGraph | ScatterGraph | BarGraph | PieGraph | BoxAndWhiskerGraph | Graph: + graph_type = _get_type_of_graph(ax) + + if graph_type == GraphType.LINE: + graph = LineGraph(ax=ax) + elif graph_type == GraphType.SCATTER: + graph = ScatterGraph(ax=ax) + elif graph_type == GraphType.BAR: + graph = BarGraph(ax=ax) + elif graph_type == GraphType.PIE: + graph = PieGraph(ax=ax) + elif graph_type == GraphType.BOX_AND_WHISKER: + graph = BoxAndWhiskerGraph(ax=ax) + else: + graph = Graph(ax=ax, type=graph_type) + + return graph + + +def graph_figure_to_graph(figure: Figure) -> Optional[Graph]: + """ + This method is used to extract data from the figure object to a dictionary + """ + # Get all Axes objects from the Figure + axes = figure.get_axes() + + if not axes: + return + elif len(axes) > 1: + return SuperGraph(figure=figure) + else: + ax = axes[0] + return get_graph_from_ax(ax) + + +def graph_figure_to_dict(figure: Figure) -> dict: + graph = graph_figure_to_graph(figure) + if graph: + return graph.model_dump() + return {} diff --git a/chart_data_extractor/e2b_charts/utils/__init__.py b/chart_data_extractor/e2b_charts/utils/__init__.py new file mode 100644 index 00000000..7822a91f --- /dev/null +++ b/chart_data_extractor/e2b_charts/utils/__init__.py @@ -0,0 +1 @@ +from .filtering import is_grid_line diff --git a/chart_data_extractor/e2b_charts/utils/filtering.py b/chart_data_extractor/e2b_charts/utils/filtering.py new file mode 100644 index 00000000..8394c27b --- /dev/null +++ b/chart_data_extractor/e2b_charts/utils/filtering.py @@ -0,0 +1,16 @@ +from matplotlib.lines import Line2D + + +def is_grid_line(line: Line2D) -> bool: + x_data = line.get_xdata() + if len(x_data) != 2: + return False + + y_data = line.get_ydata() + if len(y_data) != 2: + return False + + if x_data[0] == x_data[1] or y_data[0] == y_data[1]: + return True + + return False diff --git a/chart_data_extractor/e2b_charts/utils/rounding.py b/chart_data_extractor/e2b_charts/utils/rounding.py new file mode 100644 index 00000000..4efbb667 --- /dev/null +++ b/chart_data_extractor/e2b_charts/utils/rounding.py @@ -0,0 +1,13 @@ +from decimal import Decimal, localcontext + + +def dynamic_round(number): + # Convert to Decimal for precise control + decimal_number = Decimal(str(number)) + + # Dynamically determine precision based on magnitude + precision = max(1, 8 - decimal_number.adjusted()) # 8 digits of precision + + with localcontext() as ctx: + ctx.prec = precision # Set the dynamic precision + return +decimal_number # The + operator applies rounding diff --git a/chart_data_extractor/package.json b/chart_data_extractor/package.json new file mode 100644 index 00000000..7665dee7 --- /dev/null +++ b/chart_data_extractor/package.json @@ -0,0 +1,11 @@ +{ + "name": "@e2b/data-extractor", + "private": true, + "version": "0.0.1", + "scripts": { + "test": "poetry run pytest -n 4 --verbose -x", + "example": "poetry run python3 example.py", + "postVersion": "poetry version $(pnpm pkg get version --workspaces=false | tr -d \\\")", + "pretest": "poetry install" + } +} diff --git a/chart_data_extractor/poetry.lock b/chart_data_extractor/poetry.lock new file mode 100644 index 00000000..1a4794e9 --- /dev/null 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"https://github.com/e2b-dev/code-interpreter/issues" diff --git a/chart_data_extractor/tests/graphs/test_bar.py b/chart_data_extractor/tests/graphs/test_bar.py new file mode 100644 index 00000000..86f27bb0 --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_bar.py @@ -0,0 +1,49 @@ +import matplotlib.pyplot as plt + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import BarGraph, GraphType + + +def _prep_graph_figure(): + # Prepare data + authors = ["Author A", "Author B", "Author C", "Author D"] + sales = [100, 200, 300, 400] + + # Create and customize the bar graph + plt.figure(figsize=(10, 6)) + plt.bar(authors, sales, label="Books Sold", color="blue") + plt.xlabel("Authors") + plt.ylabel("Number of Books Sold") + plt.title("Book Sales by Authors") + + # Display the graph + plt.tight_layout() + return plt.gcf() + + +def test_graph_bar(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, BarGraph) + assert graph.type == GraphType.BAR + assert graph.title == "Book Sales by Authors" + + assert graph.x_label == "Authors" + assert graph.y_label == "Number of Books Sold" + + assert graph.x_unit is None + assert graph.y_unit is None + + bars = graph.elements + assert len(bars) == 4 + + assert [bar.value for bar in bars] == [100, 200, 300, 400] + assert [bar.label for bar in bars] == [ + "Author A", + "Author B", + "Author C", + "Author D", + ] + assert [bar.group for bar in bars] == ["Books Sold"] * 4 diff --git a/chart_data_extractor/tests/graphs/test_box_and_whiskers.py b/chart_data_extractor/tests/graphs/test_box_and_whiskers.py new file mode 100644 index 00000000..06b17599 --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_box_and_whiskers.py @@ -0,0 +1,57 @@ +import matplotlib.pyplot as plt + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import BoxAndWhiskerGraph, GraphType + + +def _prep_graph_figure(): + # Sample data + data = { + "Class A": [85, 90, 78, 92, 88], + "Class B": [95, 89, 76, 91, 84, 87], + "Class C": [75, 82, 88, 79, 86], + } + + # Create figure and axis + fig, ax = plt.subplots(figsize=(10, 6)) + + # Plot box plot + ax.boxplot(data.values(), tick_labels=data.keys()) + + # Customize plot + ax.set_title("Exam Scores Distribution") + ax.set_xlabel("Class") + ax.set_ylabel("Score") + + # Set custom colors + ax.boxplot(data.values(), tick_labels=data.keys(), patch_artist=True) + + # Adjust layout and show plot + plt.tight_layout() + return plt.gcf() + + +def test_box_and_whiskers(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, BoxAndWhiskerGraph) + assert graph.type == GraphType.BOX_AND_WHISKER + assert graph.title == "Exam Scores Distribution" + + assert graph.x_label == "Class" + assert graph.y_label == "Score" + + assert graph.x_unit is None + assert graph.y_unit is None + + bars = graph.elements + assert len(bars) == 3 + + assert all(isinstance(bar.min, float) for bar in bars) + assert all(isinstance(bar.first_quartile, float) for bar in bars) + assert all(isinstance(bar.median, float) for bar in bars) + assert all(isinstance(bar.third_quartile, float) for bar in bars) + assert all(isinstance(bar.max, float) for bar in bars) + assert all(isinstance(bar.label, str) for bar in bars) diff --git a/chart_data_extractor/tests/graphs/test_categorical_scale.py b/chart_data_extractor/tests/graphs/test_categorical_scale.py new file mode 100644 index 00000000..aaaea036 --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_categorical_scale.py @@ -0,0 +1,27 @@ +import numpy as np +import matplotlib.pyplot as plt +import datetime + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import LineGraph + + +def _prep_graph_figure(): + x = [1, 2, 3, 4, 5] + y = ["A", "B", "C", "D", "E"] + + # Create the plot + plt.figure(figsize=(10, 6)) + plt.plot(x, y) + + return plt.gcf() + + +def test_categorical_scale(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, LineGraph) + assert graph.x_scale == "linear" + assert graph.y_scale == "categorical" diff --git a/chart_data_extractor/tests/graphs/test_datetime_scale.py b/chart_data_extractor/tests/graphs/test_datetime_scale.py new file mode 100644 index 00000000..73807f3e --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_datetime_scale.py @@ -0,0 +1,30 @@ +import numpy as np +import matplotlib.pyplot as plt +import datetime + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import LineGraph + + +def _prep_graph_figure(): + # Generate x values + dates = [ + datetime.date(2023, 9, 1) + datetime.timedelta(seconds=i) for i in range(100) + ] + y_sin = np.sin(np.linspace(0, 2 * np.pi, 100)) + + # Create the plot + plt.figure(figsize=(10, 6)) + plt.plot(dates, y_sin, label="sin(x)") + + return plt.gcf() + + +def test_datetime_scale(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, LineGraph) + assert graph.x_scale == "datetime" + assert graph.y_scale == "linear" diff --git a/chart_data_extractor/tests/graphs/test_line.py b/chart_data_extractor/tests/graphs/test_line.py new file mode 100644 index 00000000..aa162afb --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_line.py @@ -0,0 +1,74 @@ +import numpy as np +import matplotlib.pyplot as plt +import datetime + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import LineGraph + + +def _prep_graph_figure(): + # Generate x values + dates = [ + datetime.date(2023, 9, 1) + datetime.timedelta(seconds=i) for i in range(100) + ] + + x = np.linspace(0, 2 * np.pi, 100) + # Calculate y values + y_sin = np.sin(x) + y_cos = np.cos(x) + + # Create the plot + plt.figure(figsize=(10, 6)) + plt.plot(dates, y_sin, label="sin(x)") + plt.plot(dates, y_cos, label="cos(x)") + + # Add labels and title + plt.xlabel("Time (s)") + plt.ylabel("Amplitude (Hz)") + plt.title("Plot of sin(x) and cos(x)") + + return plt.gcf() + + +def test_line_graph(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, LineGraph) + assert graph.title == "Plot of sin(x) and cos(x)" + + assert graph.x_label == "Time (s)" + assert graph.y_label == "Amplitude (Hz)" + + assert graph.x_unit == "s" + assert graph.y_unit == "Hz" + + assert graph.x_scale == "datetime" + assert graph.y_scale == "linear" + + assert all(isinstance(x, str) for x in graph.x_ticks) + parsed_date = datetime.datetime.fromisoformat(graph.x_ticks[0]) + assert isinstance(parsed_date, datetime.datetime) + assert all(isinstance(y, float) for y in graph.y_ticks) + + assert all(isinstance(x, str) for x in graph.y_tick_labels) + assert all(isinstance(y, str) for y in graph.y_tick_labels) + + lines = graph.elements + assert len(lines) == 2 + + first_line = lines[0] + assert first_line.label == "sin(x)" + assert len(first_line.points) == 100 + assert all(isinstance(point, tuple) for point in first_line.points) + assert all( + isinstance(x, str) and isinstance(y, float) for x, y in first_line.points + ) + + parsed_date = datetime.datetime.fromisoformat(first_line.points[0][0]) + assert isinstance(parsed_date, datetime.datetime) + + second_line = lines[1] + assert second_line.label == "cos(x)" + assert len(second_line.points) == 100 diff --git a/chart_data_extractor/tests/graphs/test_log_graph.py b/chart_data_extractor/tests/graphs/test_log_graph.py new file mode 100644 index 00000000..deba7fb4 --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_log_graph.py @@ -0,0 +1,63 @@ +import numpy as np +import matplotlib.pyplot as plt + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import LineGraph + + +def _prep_graph_figure(): + # Generate x values + x = np.linspace(0, 100, 100) + # Calculate y values + y = np.exp(x) + + # Create the plot + plt.figure(figsize=(10, 6)) + plt.plot(x, y, label="y = e^x") + + # Set log scale for the y-axis + plt.yscale("log") + + # Add labels and title + plt.xlabel("X-axis") + plt.ylabel("Y-axis (log scale)") + plt.title("Graph with Log Scale on Y-axis") + + plt.legend() + plt.grid(True) + + return plt.gcf() + + +def test_log_graph(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, LineGraph) + assert graph.title == "Graph with Log Scale on Y-axis" + + assert graph.x_label == "X-axis" + assert graph.y_label == "Y-axis (log scale)" + + assert graph.x_unit == None + assert graph.y_unit == "log scale" + + assert graph.x_scale == "linear" + assert graph.y_scale == "log" + + assert all(isinstance(x, float) for x in graph.x_ticks) + assert all(isinstance(y, float) for y in graph.y_ticks) + + assert all(isinstance(x, str) for x in graph.x_tick_labels) + assert all(isinstance(y, str) for y in graph.y_tick_labels) + + lines = graph.elements + assert len(lines) == 1 + + line = lines[0] + assert line.label == "y = e^x" + assert len(line.points) == 100 + + assert all(isinstance(x, tuple) for x in line.points) + assert all(isinstance(x, float) and isinstance(y, float) for x, y in line.points) diff --git a/chart_data_extractor/tests/graphs/test_pie.py b/chart_data_extractor/tests/graphs/test_pie.py new file mode 100644 index 00000000..103b8a08 --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_pie.py @@ -0,0 +1,53 @@ +import matplotlib.pyplot as plt + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import PieGraph + + +def _prep_graph_figure(): + # Step 1: Define the data for the pie chart + categories = ["No", "No, in blue"] + sizes = [90, 10] + + # Step 2: Create the figure and axis objects + fig, ax = plt.subplots(figsize=(8, 8)) + + plt.xlabel("x") + plt.ylabel("y") + + # Step 3: Create the pie chart + ax.pie( + sizes, + labels=categories, + autopct="%1.1f%%", + startangle=90, + colors=plt.cm.Pastel1.colors[: len(categories)], + ) + + # Step 4: Add title and legend + ax.axis("equal") # Equal aspect ratio ensures that pie is drawn as a circle + plt.title("Will I wake up early tomorrow?") + + return plt.gcf() + + +def test_pie_graph(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, PieGraph) + + assert graph.title == "Will I wake up early tomorrow?" + + assert len(graph.elements) == 2 + + first_data = graph.elements[0] + assert first_data.label == "No" + assert first_data.angle == 324 + assert first_data.radius == 1 + + second_data = graph.elements[1] + assert second_data.label == "No, in blue" + assert second_data.angle == 36 + assert second_data.radius == 1 diff --git a/chart_data_extractor/tests/graphs/test_scatter.py b/chart_data_extractor/tests/graphs/test_scatter.py new file mode 100644 index 00000000..a30bc2d9 --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_scatter.py @@ -0,0 +1,58 @@ +import matplotlib.pyplot as plt +import numpy as np + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import ScatterGraph + + +def _prep_graph_figure(): + # Create data + N = 5 + x1 = np.random.rand(N) + y1 = np.random.rand(N) + x2 = np.random.rand(2 * N) + y2 = np.random.rand(2 * N) + + plt.figure(figsize=(10, 6)) + + plt.xlabel("A") + plt.ylabel("B") + + plt.scatter(x1, y1, c="blue", label="Dataset 1") + plt.scatter(x2, y2, c="red", label="Dataset 2") + + return plt.gcf() + + +def test_scatter_graph(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, ScatterGraph) + + assert graph.title is None + assert graph.x_label == "A" + assert graph.y_label == "B" + + assert graph.x_scale == "linear" + assert graph.y_scale == "linear" + + assert all(isinstance(x, float) for x in graph.x_ticks) + assert all(isinstance(y, float) for y in graph.y_ticks) + + assert all(isinstance(x, str) for x in graph.y_tick_labels) + assert all(isinstance(y, str) for y in graph.y_tick_labels) + + assert len(graph.elements) == 2 + + first_data = graph.elements[0] + assert first_data.label == "Dataset 1" + assert len(first_data.points) == 5 + print(first_data.points) + assert all(isinstance(x, tuple) for x in first_data.points) + + second_data = graph.elements[1] + assert second_data.label == "Dataset 2" + assert len(second_data.points) == 10 + assert all(isinstance(x, tuple) for x in second_data.points) diff --git a/chart_data_extractor/tests/graphs/test_supergraph.py b/chart_data_extractor/tests/graphs/test_supergraph.py new file mode 100644 index 00000000..c5a1b23d --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_supergraph.py @@ -0,0 +1,66 @@ +import matplotlib.pyplot as plt +import numpy as np + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import ( + GraphType, + LineGraph, + ScatterGraph, +) +from e2b_charts.main import SuperGraph + + +def _prep_graph_figure(): + # Data for plotting + x1 = np.linspace(0, 10, 100) + y1 = np.sin(x1) + + # Create a figure with multiple subplots + fig, axs = plt.subplots(1, 2, figsize=(10, 8)) + fig.suptitle("Multiple Graphs Example", fontsize=16) + + # Plotting on the different axes + axs[0].plot(x1, y1, "r") + axs[0].set_title("Sine Wave") + axs[0].grid(True) + + N = 5 + x2 = np.random.rand(N) + y2 = np.random.rand(N) + + axs[1].scatter(x2, y2, c="blue", label="Dataset 1") + axs[1].set_xlabel("X") + axs[1].set_ylabel("Y") + axs[1].set_title("Scatter Plot") + axs[1].grid(True) + + return plt.gcf() + + +def test_super_graph(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, SuperGraph) + assert graph.type == GraphType.SUPERGRAPH + assert graph.title == "Multiple Graphs Example" + + graphs = graph.elements + assert len(graphs) == 2 + + first_graph = graphs[0] + assert first_graph.title == "Sine Wave" + assert isinstance(first_graph, LineGraph) + assert first_graph.x_label is None + assert first_graph.y_label is None + assert len(first_graph.elements) == 1 + assert len(first_graph.elements[0].points) == 100 + + second_graph = graphs[1] + assert second_graph.title == "Scatter Plot" + assert isinstance(second_graph, ScatterGraph) + assert second_graph.x_label == "X" + assert second_graph.y_label == "Y" + assert len(second_graph.elements) == 1 + assert len(second_graph.elements[0].points) == 5 diff --git a/chart_data_extractor/tests/graphs/test_unknown.py b/chart_data_extractor/tests/graphs/test_unknown.py new file mode 100644 index 00000000..52b3e6cd --- /dev/null +++ b/chart_data_extractor/tests/graphs/test_unknown.py @@ -0,0 +1,37 @@ +import matplotlib.pyplot as plt + +from e2b_charts import graph_figure_to_graph +from e2b_charts.graphs import Graph, GraphType + + +def _prep_graph_figure(): + # Create a figure and an axis + fig, ax = plt.subplots() + + # Create data for two concentric circles + circle1 = plt.Circle((0, 0), 1, color="blue", fill=False, linewidth=2) + circle2 = plt.Circle((0, 0), 2, color="red", fill=False, linewidth=2) + + # Add the circles to the axes + ax.add_artist(circle1) + ax.add_artist(circle2) + + # Set grid + ax.grid(True) + + # Set title + plt.title("Two Concentric Circles") + + return plt.gcf() + + +def test_unknown_graphs(): + figure = _prep_graph_figure() + graph = graph_figure_to_graph(figure) + assert graph + + assert isinstance(graph, Graph) + assert graph.type == GraphType.UNKNOWN + assert graph.title == "Two Concentric Circles" + + assert len(graph.elements) == 0 diff --git a/chart_data_extractor/tests/utils/test_detect_scale.py b/chart_data_extractor/tests/utils/test_detect_scale.py new file mode 100644 index 00000000..41314b71 --- /dev/null +++ b/chart_data_extractor/tests/utils/test_detect_scale.py @@ -0,0 +1,24 @@ +import datetime + +from matplotlib.dates import _SwitchableDateConverter + +from e2b_charts.graphs.planar import PointGraph + + +def test_detect_scale(): + datetime_converter = _SwitchableDateConverter() + scale = PointGraph._detect_scale( + datetime_converter, "linear", 3 * [datetime.date.today()], ["1", "2", "3"] + ) + assert scale == "datetime" + + scale = PointGraph._detect_scale(None, "linear", [1, 2, 3], ["1", "2", "3"]) + assert scale == "linear" + + scale = PointGraph._detect_scale( + None, "linear", [0, 1, 2], ["First", "Second", "Third"] + ) + assert scale == "categorical" + + scale = PointGraph._detect_scale(None, "log", [1, 10, 100], ["1", "10", "100"]) + assert scale == "log" diff --git a/chart_data_extractor/tests/utils/test_is_grid_line.py b/chart_data_extractor/tests/utils/test_is_grid_line.py new file mode 100644 index 00000000..02dcd2fe --- /dev/null +++ b/chart_data_extractor/tests/utils/test_is_grid_line.py @@ -0,0 +1,17 @@ +from matplotlib.lines import Line2D + +from e2b_charts.utils.filtering import is_grid_line + + +def test_is_grid_line(): + not_a_grid_line = Line2D([1, 2], [2, 3]) + assert not is_grid_line(not_a_grid_line) + + horizontal_grid_line = Line2D([1, 2], [2, 2]) + assert is_grid_line(horizontal_grid_line) + + vertical_grid_line = Line2D([1, 1], [2, 3]) + assert is_grid_line(vertical_grid_line) + + long_line = Line2D([1, 1, 1, 1], [2, 3, 4, 5]) + assert not is_grid_line(long_line) diff --git a/pnpm-workspace.yaml b/pnpm-workspace.yaml index c9a0a34e..16b006b4 100644 --- a/pnpm-workspace.yaml +++ b/pnpm-workspace.yaml @@ -1,3 +1,4 @@ packages: - js - python + - chart_data_extractor diff --git a/template/requirements.txt b/template/requirements.txt index 01588ce5..502e79c6 100644 --- a/template/requirements.txt +++ b/template/requirements.txt @@ -3,6 +3,9 @@ jupyter-server==2.13.0 ipykernel==6.29.3 ipython==8.22.2 +# Latest version for +e2b_charts + # Other packages aiohttp==3.9.3 beautifulsoup4==4.12.3 @@ -11,7 +14,7 @@ gensim==4.3.2 imageio==2.34.0 joblib==1.3.2 librosa==0.10.1 -matplotlib==3.8.3 +matplotlib==3.9.2 nltk==3.8.1 numpy==1.26.4 opencv-python==4.9.0.80 diff --git a/template/startup_scripts/0002_data.py b/template/startup_scripts/0002_data.py index 2fd22b13..6308cf79 100644 --- a/template/startup_scripts/0002_data.py +++ b/template/startup_scripts/0002_data.py @@ -1,469 +1,10 @@ -from datetime import date -import enum -import re -from decimal import Decimal, localcontext -from typing import Optional, List, Tuple, Literal, Any, Union, Sequence - -import matplotlib -import numpy import pandas -from matplotlib.axes import Axes -from matplotlib.collections import PathCollection -from matplotlib.lines import Line2D -from matplotlib.patches import Rectangle, Wedge, PathPatch from matplotlib.pyplot import Figure -from matplotlib.dates import _SwitchableDateConverter import IPython - from IPython.core.formatters import BaseFormatter -from matplotlib.text import Text -from pydantic import BaseModel, Field, field_validator from traitlets.traitlets import Unicode, ObjectName - -def _is_grid_line(line: Line2D) -> bool: - x_data = line.get_xdata() - if len(x_data) != 2: - return False - - y_data = line.get_ydata() - if len(y_data) != 2: - return False - - if x_data[0] == x_data[1] or y_data[0] == y_data[1]: - return True - - return False - - -def _dynamic_round(number): - # Convert to Decimal for precise control - decimal_number = Decimal(str(number)) - - # Dynamically determine precision based on magnitude - precision = max(1, 8 - decimal_number.adjusted()) # 8 digits of precision - - with localcontext() as ctx: - ctx.prec = precision # Set the dynamic precision - return +decimal_number # The + operator applies rounding - - -class ChartType(str, enum.Enum): - LINE = "line" - SCATTER = "scatter" - BAR = "bar" - PIE = "pie" - BOX_AND_WHISKER = "box_and_whisker" - SUPERCHART = "superchart" - UNKNOWN = "unknown" - - -class Chart(BaseModel): - type: ChartType - title: Optional[str] = None - - elements: List[Any] = Field(default_factory=list) - - def __init__(self, ax: Optional[Axes] = None, **kwargs): - super().__init__(**kwargs) - if ax: - self._extract_info(ax) - - def _extract_info(self, ax: Axes) -> None: - """ - Function to extract information for Chart - """ - title = ax.get_title() - if title == "": - title = None - - self.title = title - - -class Chart2D(Chart): - x_label: Optional[str] = None - y_label: Optional[str] = None - x_unit: Optional[str] = None - y_unit: Optional[str] = None - - def _extract_info(self, ax: Axes) -> None: - """ - Function to extract information for Chart2D - """ - super()._extract_info(ax) - x_label = ax.get_xlabel() - if x_label == "": - x_label = None - self.x_label = x_label - - y_label = ax.get_ylabel() - if y_label == "": - y_label = None - self.y_label = y_label - - regex = r"\s\((.*?)\)|\[(.*?)\]" - if self.x_label: - match = re.search(regex, self.x_label) - if match: - self.x_unit = match.group(1) or match.group(2) - - if self.y_label: - match = re.search(regex, self.y_label) - if match: - self.y_unit = match.group(1) or match.group(2) - - def _change_orientation(self): - self.x_label, self.y_label = self.y_label, self.x_label - self.x_unit, self.y_unit = self.y_unit, self.x_unit - - -class PointData(BaseModel): - label: str - points: List[Tuple[Union[str, float], Union[str, float]]] - - @field_validator("points", mode="before") - @classmethod - def transform_points( - cls, value - ) -> List[Tuple[Union[str, float], Union[str, float]]]: - parsed_value = [] - for x, y in value: - if isinstance(x, date): - x = x.isoformat() - if isinstance(x, numpy.datetime64): - x = x.astype("datetime64[s]").astype(str) - - if isinstance(y, date): - y = y.isoformat() - if isinstance(y, numpy.datetime64): - y = y.astype("datetime64[s]").astype(str) - - parsed_value.append((x, y)) - return parsed_value - - -class PointChart(Chart2D): - x_ticks: List[Union[str, float]] = Field(default_factory=list) - x_tick_labels: List[str] = Field(default_factory=list) - x_scale: str = Field(default="linear") - - y_ticks: List[Union[str, float]] = Field(default_factory=list) - y_tick_labels: List[str] = Field(default_factory=list) - y_scale: str = Field(default="linear") - - elements: List[PointData] = Field(default_factory=list) - - def _extract_info(self, ax: Axes) -> None: - """ - Function to extract information for PointChart - """ - super()._extract_info(ax) - - self.x_tick_labels = [label.get_text() for label in ax.get_xticklabels()] - - x_ticks = ax.get_xticks() - self.x_ticks = self._extract_ticks_info(ax.xaxis.converter, x_ticks) - self.x_scale = self._detect_scale( - ax.xaxis.converter, ax.get_xscale(), self.x_ticks, self.x_tick_labels - ) - - self.y_tick_labels = [label.get_text() for label in ax.get_yticklabels()] - self.y_ticks = self._extract_ticks_info(ax.yaxis.converter, ax.get_yticks()) - self.y_scale = self._detect_scale( - ax.yaxis.converter, ax.get_yscale(), self.y_ticks, self.y_tick_labels - ) - - @staticmethod - def _detect_scale(converter, scale: str, ticks: Sequence, labels: Sequence) -> str: - # If the converter is a date converter, it's a datetime scale - if isinstance(converter, _SwitchableDateConverter): - return "datetime" - - # If the scale is not linear, it can't be categorical - if scale != "linear": - return scale - - # If all the ticks are integers and are in order from 0 to n-1 - # and the labels aren't corresponding to the ticks, it's categorical - for i, tick_and_label in enumerate(zip(ticks, labels)): - tick, label = tick_and_label - if isinstance(tick, (int, float)) and tick == i and str(i) != label: - continue - # Found a tick, which wouldn't be in a categorical scale - return "linear" - - return "categorical" - - @staticmethod - def _extract_ticks_info(converter: Any, ticks: Sequence) -> list: - if isinstance(converter, _SwitchableDateConverter): - return [matplotlib.dates.num2date(tick).isoformat() for tick in ticks] - else: - example_tick = ticks[0] - - if isinstance(example_tick, (int, float)): - return [float(tick) for tick in ticks] - else: - return list(ticks) - - -class LineChart(PointChart): - type: Literal[ChartType.LINE] = ChartType.LINE - - def _extract_info(self, ax: Axes) -> None: - super()._extract_info(ax) - - for line in ax.get_lines(): - if _is_grid_line(line): - continue - label = line.get_label() - if label.startswith("_child"): - number = int(label[6:]) - label = f"Line {number}" - - points = [(x, y) for x, y in zip(line.get_xdata(), line.get_ydata())] - line_data = PointData(label=label, points=points) - self.elements.append(line_data) - - -class ScatterChart(PointChart): - type: Literal[ChartType.SCATTER] = ChartType.SCATTER - - def _extract_info(self, ax: Axes) -> None: - super()._extract_info(ax) - - for collection in ax.collections: - points = [(x, y) for x, y in collection.get_offsets()] - scatter_data = PointData(label=collection.get_label(), points=points) - self.elements.append(scatter_data) - - -class BarData(BaseModel): - label: str - group: str - value: float - - -class BarChart(Chart2D): - type: Literal[ChartType.BAR] = ChartType.BAR - - elements: List[BarData] = Field(default_factory=list) - - def _extract_info(self, ax: Axes) -> None: - super()._extract_info(ax) - for container in ax.containers: - group_label = container.get_label() - if group_label.startswith("_container"): - number = int(group_label[10:]) - group_label = f"Group {number}" - - heights = [rect.get_height() for rect in container] - if all(height == heights[0] for height in heights): - # vertical bars - self._change_orientation() - labels = [label.get_text() for label in ax.get_yticklabels()] - values = [rect.get_width() for rect in container] - else: - # horizontal bars - labels = [label.get_text() for label in ax.get_xticklabels()] - values = heights - for label, value in zip(labels, values): - - bar = BarData(label=label, value=value, group=group_label) - self.elements.append(bar) - - -class PieData(BaseModel): - label: str - angle: float - radius: float - - -class PieChart(Chart): - type: Literal[ChartType.PIE] = ChartType.PIE - - elements: List[PieData] = Field(default_factory=list) - - def _extract_info(self, ax: Axes) -> None: - super()._extract_info(ax) - - for wedge in ax.patches: - pie_data = PieData( - label=wedge.get_label(), - angle=abs( - _dynamic_round(Decimal(wedge.theta2) - Decimal(wedge.theta1)) - ), - radius=wedge.r, - ) - - self.elements.append(pie_data) - - -class BoxAndWhiskerData(BaseModel): - label: str - min: float - first_quartile: float - median: float - third_quartile: float - max: float - outliers: List[float] = Field(default_factory=list) - - -class BoxAndWhiskerChart(Chart2D): - type: Literal[ChartType.BOX_AND_WHISKER] = ChartType.BOX_AND_WHISKER - - elements: List[BoxAndWhiskerData] = Field(default_factory=list) - - def _extract_info(self, ax: Axes) -> None: - super()._extract_info(ax) - - labels = [item.get_text() for item in ax.get_xticklabels()] - - boxes = [] - for label, box in zip(labels, ax.patches): - vertices = box.get_path().vertices - x_vertices = [_dynamic_round(x) for x in vertices[:, 0]] - y_vertices = [_dynamic_round(y) for y in vertices[:, 1]] - x = min(x_vertices) - y = min(y_vertices) - boxes.append( - { - "x": x, - "y": y, - "label": label, - "width": max(x_vertices) - x, - "height": max(y_vertices) - y, - "outliers": [], - } - ) - - orientation = "horizontal" - if all(box["height"] == boxes[0]["height"] for box in boxes): - orientation = "vertical" - - if orientation == "vertical": - self._change_orientation() - for box in boxes: - box["x"], box["y"] = box["y"], box["x"] - box["width"], box["height"] = box["height"], box["width"] - - for i, line in enumerate(ax.lines): - xdata = [_dynamic_round(x) for x in line.get_xdata()] - ydata = [_dynamic_round(y) for y in line.get_ydata()] - - if orientation == "vertical": - xdata, ydata = ydata, xdata - - if len(xdata) == 1: - for box in boxes: - if box["x"] <= xdata[0] <= box["x"] + box["width"]: - break - else: - continue - - box["outliers"].append(ydata[0]) - if len(ydata) != 2: - continue - for box in boxes: - if box["x"] <= xdata[0] <= xdata[1] <= box["x"] + box["width"]: - break - else: - continue - - if ( - # Check if the line is inside the box, prevent floating point errors - ydata[0] == ydata[1] - and box["y"] <= ydata[0] <= box["y"] + box["height"] - ): - box["median"] = ydata[0] - continue - - lower_value = min(ydata) - upper_value = max(ydata) - if upper_value == box["y"]: - box["whisker_lower"] = lower_value - elif lower_value == box["y"] + box["height"]: - box["whisker_upper"] = upper_value - - self.elements = [ - BoxAndWhiskerData( - label=box["label"], - min=box["whisker_lower"], - first_quartile=box["y"], - median=box["median"], - third_quartile=box["y"] + box["height"], - max=box["whisker_upper"], - outliers=box["outliers"], - ) - for box in boxes - ] - - -class SuperChart(Chart): - type: Literal[ChartType.SUPERCHART] = ChartType.SUPERCHART - elements: List[ - LineChart | ScatterChart | BarChart | PieChart | BoxAndWhiskerChart - ] = Field(default_factory=list) - - def __init__(self, figure: Figure): - title = figure.get_suptitle() - super().__init__(title=title) - - self.elements = [get_chart_from_ax(ax) for ax in figure.axes] - - -def _get_type_of_chart(ax: Axes) -> ChartType: - objects = list(filter(lambda obj: not isinstance(obj, Text), ax._children)) - - # Check for Line plots - if all(isinstance(line, Line2D) for line in objects): - return ChartType.LINE - - if all(isinstance(box_or_path, (PathPatch, Line2D)) for box_or_path in objects): - return ChartType.BOX_AND_WHISKER - - filtered = [] - for obj in objects: - if isinstance(obj, Line2D) and _is_grid_line(obj): - continue - filtered.append(obj) - - objects = filtered - - # Check for Scatter plots - if all(isinstance(path, PathCollection) for path in objects): - return ChartType.SCATTER - - # Check for Pie plots - if all(isinstance(artist, Wedge) for artist in objects): - return ChartType.PIE - - # Check for Bar plots - if all(isinstance(rect, Rectangle) for rect in objects): - return ChartType.BAR - - return ChartType.UNKNOWN - - -def get_chart_from_ax( - ax: Axes, -) -> LineChart | ScatterChart | BarChart | PieChart | BoxAndWhiskerChart | Chart: - chart_type = _get_type_of_chart(ax) - - if chart_type == ChartType.LINE: - chart = LineChart(ax=ax) - elif chart_type == ChartType.SCATTER: - chart = ScatterChart(ax=ax) - elif chart_type == ChartType.BAR: - chart = BarChart(ax=ax) - elif chart_type == ChartType.PIE: - chart = PieChart(ax=ax) - elif chart_type == ChartType.BOX_AND_WHISKER: - chart = BoxAndWhiskerChart(ax=ax) - else: - chart = Chart(ax=ax, type=chart_type) - - return chart +from e2b_charts import graph_figure_to_graph def _figure_repr_e2b_chart_(self: Figure): @@ -471,17 +12,8 @@ def _figure_repr_e2b_chart_(self: Figure): This method is used to extract data from the figure object to a dictionary """ # Get all Axes objects from the Figure - axes = self.get_axes() - try: - if not axes: - return {} - elif len(axes) > 1: - chart = SuperChart(figure=self) - else: - ax = axes[0] - chart = get_chart_from_ax(ax) - return chart.model_dump() + return graph_figure_to_graph(self) except: return {}