Fix pre-commit CI failures

- Remove trailing whitespace in reproduce/docker/setup.sh
- Fix shellcheck SC2269: remove self-assignment in arch case
- Add shellcheck disable SC2016 for intentional single quotes in binder/postBuild
- Add ruff per-file-ignores for notebooks (E402, F404)
- Remove pip-compile hook (project uses uv.lock not requirements.txt)

Author: llorracc

.pre-commit-config.yaml

@@ -3,13 +3,6 @@ ci:
   autofix_commit_msg: "style: pre-commit fixes"
 
 repos:
-  - repo: https://github.com/astral-sh/uv-pre-commit
-    rev: 0.8.14
-    hooks:
-      - id: pip-compile
-        args: [pyproject.toml, --output-file, requirements.txt]
-        files: ^(pyproject\.toml|requirements\.txt)$
-
   - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: "v6.0.0"
     hooks:

binder/postBuild

@@ -59,6 +59,7 @@ if os.path.isdir(code_dir) and code_dir not in sys.path:
 PYEOF
 
 # Also set for shell sessions
+# shellcheck disable=SC2016  # Single quotes are intentional - variables expand at runtime
 echo 'export PYTHONPATH="$HOME/code:$PYTHONPATH"' >> ~/.bashrc
 
 # ============================================================================

pyproject.toml

@@ -46,6 +46,10 @@ extend-select = [
   "UP",       # pyupgrade
 ]
 
+[tool.ruff.lint.per-file-ignores]
+# Notebooks have different import conventions
+"*.ipynb" = ["E402", "F404"]
+
 
 
 [tool.uv.sources]

reproduce/docker/setup.sh

@@ -25,7 +25,7 @@ get_platform_venv_path() {
     local workspace_dir="$1"
     local platform=""
     local arch=""
-    
+
     # Detect platform
     case "$(uname -s)" in
         Darwin)
@@ -47,15 +47,15 @@ get_platform_venv_path() {
             return
             ;;
     esac
-    
+
     # Normalize architecture names
     case "$arch" in
         arm64) arch="arm64" ;;       # macOS ARM
         aarch64) arch="aarch64" ;;   # Linux ARM
         x86_64) arch="x86_64" ;;     # Both platforms
-        *) arch="$arch" ;;           # Other
+        *) ;;                        # Keep original value
     esac
-    
+
     echo "$workspace_dir/.venv-$platform-$arch"
 }