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[actions] update 15 packages
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‎.gitignore‎

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@@ -54,3 +54,4 @@ renv/sandbox # OPTIONAL
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renv/sandbox

‎renv/profiles/lesson-requirements/renv.lock‎

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{
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"R": {
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"Version": "4.5.0",
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"Version": "4.5.1",
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"Repositories": [
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{
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"Name": "CRAN",
@@ -190,7 +190,8 @@
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"URL": "https://henrikbengtsson.github.io/R.oo/, https://github.com/HenrikBengtsson/R.oo",
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"BugReports": "https://github.com/HenrikBengtsson/R.oo/issues",
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"NeedsCompilation": "no",
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"Repository": "CRAN"
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"Repository": "RSPM",
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"Encoding": "UTF-8"
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},
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"R.utils": {
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"Package": "R.utils",
@@ -1094,14 +1095,14 @@
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},
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"curl": {
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"Package": "curl",
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"Version": "6.2.3",
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"Version": "6.4.0",
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"Source": "Repository",
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"Type": "Package",
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"Title": "A Modern and Flexible Web Client for R",
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"Authors@R": "c( person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Posit Software, PBC\", role = \"cph\"))",
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"Description": "Bindings to 'libcurl' <https://curl.se/libcurl/> for performing fully configurable HTTP/FTP requests where responses can be processed in memory, on disk, or streaming via the callback or connection interfaces. Some knowledge of 'libcurl' is recommended; for a more-user-friendly web client see the 'httr2' package which builds on this package with http specific tools and logic.",
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"License": "MIT + file LICENSE",
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"SystemRequirements": "libcurl (>= 7.62): libcurl-devel (rpm) or libcurl4-openssl-dev (deb)",
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"SystemRequirements": "libcurl (>= 7.73): libcurl-devel (rpm) or libcurl4-openssl-dev (deb)",
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"URL": "https://jeroen.r-universe.dev/curl",
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"BugReports": "https://github.com/jeroen/curl/issues",
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"Suggests": [
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},
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"data.table": {
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"Package": "data.table",
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"Version": "1.17.4",
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"Version": "1.17.6",
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"Source": "Repository",
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"Title": "Extension of `data.frame`",
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"Depends": [
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},
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"evaluate": {
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"Package": "evaluate",
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"Version": "1.0.3",
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"Version": "1.0.4",
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"Source": "Repository",
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"Type": "Package",
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"Title": "Parsing and Evaluation Tools that Provide More Details than the Default",
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"lattice",
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"methods",
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"pkgload",
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"rlang",
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"ragg (>= 1.4.0)",
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"rlang (>= 1.1.5)",
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"knitr",
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"testthat (>= 3.0.0)",
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"withr"
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"Encoding": "UTF-8",
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"RoxygenNote": "7.3.2",
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"NeedsCompilation": "no",
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"Author": "Hadley Wickham [aut, cre], Yihui Xie [aut] (<https://orcid.org/0000-0003-0645-5666>), Michael Lawrence [ctb], Thomas Kluyver [ctb], Jeroen Ooms [ctb], Barret Schloerke [ctb], Adam Ryczkowski [ctb], Hiroaki Yutani [ctb], Michel Lang [ctb], Karolis Koncevičius [ctb], Posit Software, PBC [cph, fnd]",
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"Author": "Hadley Wickham [aut, cre], Yihui Xie [aut] (ORCID: <https://orcid.org/0000-0003-0645-5666>), Michael Lawrence [ctb], Thomas Kluyver [ctb], Jeroen Ooms [ctb], Barret Schloerke [ctb], Adam Ryczkowski [ctb], Hiroaki Yutani [ctb], Michel Lang [ctb], Karolis Koncevičius [ctb], Posit Software, PBC [cph, fnd]",
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"Maintainer": "Hadley Wickham <hadley@posit.co>",
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"Repository": "CRAN"
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},
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"fansi": {
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"Package": "fansi",
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"Version": "1.0.6",
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"Source": "Repository",
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"Title": "ANSI Control Sequence Aware String Functions",
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"Description": "Counterparts to R string manipulation functions that account for the effects of ANSI text formatting control sequences.",
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"Authors@R": "c( person(\"Brodie\", \"Gaslam\", email=\"brodie.gaslam@yahoo.com\", role=c(\"aut\", \"cre\")), person(\"Elliott\", \"Sales De Andrade\", role=\"ctb\"), person(family=\"R Core Team\", email=\"R-core@r-project.org\", role=\"cph\", comment=\"UTF8 byte length calcs from src/util.c\" ))",
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"Depends": [
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"R (>= 3.1.0)"
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],
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"License": "GPL-2 | GPL-3",
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"URL": "https://github.com/brodieG/fansi",
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"BugReports": "https://github.com/brodieG/fansi/issues",
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"VignetteBuilder": "knitr",
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"Suggests": [
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"unitizer",
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"knitr",
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"rmarkdown"
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],
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"Imports": [
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"grDevices",
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"utils"
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],
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"RoxygenNote": "7.2.3",
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"Encoding": "UTF-8",
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"Collate": "'constants.R' 'fansi-package.R' 'internal.R' 'load.R' 'misc.R' 'nchar.R' 'strwrap.R' 'strtrim.R' 'strsplit.R' 'substr2.R' 'trimws.R' 'tohtml.R' 'unhandled.R' 'normalize.R' 'sgr.R'",
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"NeedsCompilation": "yes",
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"Author": "Brodie Gaslam [aut, cre], Elliott Sales De Andrade [ctb], R Core Team [cph] (UTF8 byte length calcs from src/util.c)",
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"Maintainer": "Brodie Gaslam <brodie.gaslam@yahoo.com>",
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"Repository": "RSPM"
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},
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"farver": {
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"Package": "farver",
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"Version": "2.1.2",
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},
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"infer": {
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"Package": "infer",
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"Version": "1.0.8",
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"Version": "1.0.9",
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"Source": "Repository",
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"Type": "Package",
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"Title": "Tidy Statistical Inference",
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"URL": "https://github.com/tidymodels/infer, https://infer.tidymodels.org/",
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"BugReports": "https://github.com/tidymodels/infer/issues",
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"Depends": [
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"R (>= 3.5.0)"
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"R (>= 4.1)"
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],
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"Imports": [
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"broom",
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],
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"VignetteBuilder": "knitr",
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"Config/Needs/website": "tidyverse/tidytemplate",
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"Config/testthat/edition": "3",
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"Config/usethis/last-upkeep": "2025-04-25",
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"Encoding": "UTF-8",
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"LazyData": "true",
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"RoxygenNote": "7.3.1",
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"Config/testthat/edition": "3",
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"RoxygenNote": "7.3.2",
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"NeedsCompilation": "no",
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"Author": "Andrew Bray [aut], Chester Ismay [aut] (<https://orcid.org/0000-0003-2820-2547>), Evgeni Chasnovski [aut] (<https://orcid.org/0000-0002-1617-4019>), Simon Couch [aut, cre] (<https://orcid.org/0000-0001-5676-5107>), Ben Baumer [aut] (<https://orcid.org/0000-0002-3279-0516>), Mine Cetinkaya-Rundel [aut] (<https://orcid.org/0000-0001-6452-2420>), Ted Laderas [ctb] (<https://orcid.org/0000-0002-6207-7068>), Nick Solomon [ctb], Johanna Hardin [ctb], Albert Y. Kim [ctb] (<https://orcid.org/0000-0001-7824-306X>), Neal Fultz [ctb], Doug Friedman [ctb], Richie Cotton [ctb] (<https://orcid.org/0000-0003-2504-802X>), Brian Fannin [ctb]",
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"Author": "Andrew Bray [aut], Chester Ismay [aut] (ORCID: <https://orcid.org/0000-0003-2820-2547>), Evgeni Chasnovski [aut] (ORCID: <https://orcid.org/0000-0002-1617-4019>), Simon Couch [aut, cre] (ORCID: <https://orcid.org/0000-0001-5676-5107>), Ben Baumer [aut] (ORCID: <https://orcid.org/0000-0002-3279-0516>), Mine Cetinkaya-Rundel [aut] (ORCID: <https://orcid.org/0000-0001-6452-2420>), Ted Laderas [ctb] (ORCID: <https://orcid.org/0000-0002-6207-7068>), Nick Solomon [ctb], Johanna Hardin [ctb], Albert Y. Kim [ctb] (ORCID: <https://orcid.org/0000-0001-7824-306X>), Neal Fultz [ctb], Doug Friedman [ctb], Richie Cotton [ctb] (ORCID: <https://orcid.org/0000-0003-2504-802X>), Brian Fannin [ctb]",
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"Maintainer": "Simon Couch <simon.couch@posit.co>",
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"Repository": "CRAN"
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},
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"NeedsCompilation": "yes",
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"Author": "Deepayan Sarkar [aut, cre] (<https://orcid.org/0000-0003-4107-1553>), Felix Andrews [ctb], Kevin Wright [ctb] (documentation), Neil Klepeis [ctb], Johan Larsson [ctb] (miscellaneous improvements), Zhijian (Jason) Wen [cph] (filled contour code), Paul Murrell [ctb], Stefan Eng [ctb] (violin plot improvements), Achim Zeileis [ctb] (modern colors), Alexandre Courtiol [ctb] (generics for larrows, lpolygon, lrect and lsegments)",
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"Maintainer": "Deepayan Sarkar <deepayan.sarkar@r-project.org>",
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"Repository": "CRAN"
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"Repository": "RSPM",
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"Encoding": "UTF-8"
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},
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"lifecycle": {
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"Package": "lifecycle",
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},
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"linelist": {
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"Package": "linelist",
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"Version": "2.0.0",
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"Version": "2.0.1",
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"Source": "Repository",
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"Title": "Tagging and Validating Epidemiological Data",
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"Authors@R": "c( person(given = \"Hugo\", family = \"Gruson\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4094-1476\"), email = \"hugo@data.org\"), person(given = \"Thibaut\", family = \"Jombart\", role = c(\"aut\", \"ccp\")), person(given = \"Tim\", family = \"Taylor\", role = \"ctb\"), person(given = \"Chris\", family = \"Hartgerink\", role = \"rev\", comment = c(ORCID = \"0000-0003-1050-6809\")) )",
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"Authors@R": "c( person(given = \"Hugo\", family = \"Gruson\", role = \"aut\", comment = c(ORCID = \"0000-0002-4094-1476\")), person(given = \"Thibaut\", family = \"Jombart\", role = c(\"aut\", \"ccp\")), person(given = \"Tim\", family = \"Taylor\", role = \"ctb\"), person(given = \"Chris\", family = \"Hartgerink\", role = c(\"cre\", \"rev\"), email = \"chris@data.org\", comment = c(ORCID = \"0000-0003-1050-6809\")) )",
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"Description": "Provides tools to help storing and handling case line list data. The 'linelist' class adds a tagging system to classical 'data.frame' objects to identify key epidemiological data such as dates of symptom onset, epidemiological case definition, age, gender or disease outcome. Once tagged, these variables can be seamlessly used in downstream analyses, making data pipelines more robust and reliable.",
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"License": "MIT + file LICENSE",
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"URL": "https://epiverse-trace.github.io/linelist/, https://github.com/epiverse-trace/linelist",
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"RoxygenNote": "7.3.2",
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"Config/testthat/edition": "3",
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"Config/testthat/parallel": "true",
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"Config/Needs/README": "incidence2 (>= 2.1.1), ggplot2",
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"Config/Needs/readme": "incidence2 (>= 2.1.1), ggplot2",
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"Depends": [
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"R (>= 4.1.0)"
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],
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"VignetteBuilder": "knitr",
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"Language": "en-GB",
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"NeedsCompilation": "no",
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"Author": "Hugo Gruson [aut, cre] (<https://orcid.org/0000-0002-4094-1476>), Thibaut Jombart [aut, ccp], Tim Taylor [ctb], Chris Hartgerink [rev] (<https://orcid.org/0000-0003-1050-6809>)",
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"Maintainer": "Hugo Gruson <hugo@data.org>",
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"Author": "Hugo Gruson [aut] (ORCID: <https://orcid.org/0000-0002-4094-1476>), Thibaut Jombart [aut, ccp], Tim Taylor [ctb], Chris Hartgerink [cre, rev] (ORCID: <https://orcid.org/0000-0003-1050-6809>)",
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"Maintainer": "Chris Hartgerink <chris@data.org>",
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"Repository": "CRAN"
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},
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"lubridate": {
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},
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"patchwork": {
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"Package": "patchwork",
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"Version": "1.3.0",
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"Version": "1.3.1",
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"Source": "Repository",
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"Type": "Package",
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"Title": "The Composer of Plots",
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"Encoding": "UTF-8",
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"Imports": [
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"ggplot2 (>= 3.0.0)",
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"stats",
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"grDevices",
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"VignetteBuilder": "knitr",
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"Config/Needs/website": "gifski",
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"NeedsCompilation": "no",
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"Author": "Thomas Lin Pedersen [cre, aut] (<https://orcid.org/0000-0002-5147-4711>)",
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"Repository": "RSPM"
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"Author": "Thomas Lin Pedersen [cre, aut] (ORCID: <https://orcid.org/0000-0002-5147-4711>)",
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"Repository": "CRAN"
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},
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"pillar": {
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"Package": "pillar",
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},
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"tibble": {
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"Package": "tibble",
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"Version": "3.2.1",
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"Version": "3.3.0",
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"Source": "Repository",
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"Title": "Simple Data Frames",
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"Authors@R": "c(person(given = \"Kirill\", family = \"M\\u00fcller\", role = c(\"aut\", \"cre\"), email = \"kirill@cynkra.com\", comment = c(ORCID = \"0000-0002-1416-3412\")), person(given = \"Hadley\", family = \"Wickham\", role = \"aut\", email = \"hadley@rstudio.com\"), person(given = \"Romain\", family = \"Francois\", role = \"ctb\", email = \"romain@r-enthusiasts.com\"), person(given = \"Jennifer\", family = \"Bryan\", role = \"ctb\", email = \"jenny@rstudio.com\"), person(given = \"RStudio\", role = c(\"cph\", \"fnd\")))",
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"R (>= 3.4.0)"
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],
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"Imports": [
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"cli",
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"lifecycle (>= 1.0.0)",
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"magrittr",
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"methods",
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"pillar (>= 1.8.1)",
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"pkgconfig",
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"rlang (>= 1.0.2)",
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"utils",
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],
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"Suggests": [
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"bench",
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"bit64",
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"blob",
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"brio",
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"callr",
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"covr",
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"crayon (>= 1.3.4)",
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"DiagrammeR",
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"dplyr",
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"evaluate",
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"htmltools",
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"knitr",
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"lubridate",
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"mockr",
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"nycflights13",
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"pkgbuild",
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"pkgload",
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"purrr",
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"rmarkdown",
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],
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"VignetteBuilder": "knitr",
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"Encoding": "UTF-8",
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"RoxygenNote": "7.2.3",
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"RoxygenNote": "7.3.2.9000",
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"Config/testthat/edition": "3",
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"Config/testthat/parallel": "true",
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"Config/testthat/start-first": "vignette-formats, as_tibble, add, invariants",
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"Config/autostyle/rmd": "false",
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"Config/Needs/website": "tidyverse/tidytemplate",
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"NeedsCompilation": "yes",
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"Author": "Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>), Hadley Wickham [aut], Romain Francois [ctb], Jennifer Bryan [ctb], RStudio [cph, fnd]",
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"Author": "Kirill Müller [aut, cre] (ORCID: <https://orcid.org/0000-0002-1416-3412>), Hadley Wickham [aut], Romain Francois [ctb], Jennifer Bryan [ctb], RStudio [cph, fnd]",
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"Maintainer": "Kirill Müller <kirill@cynkra.com>",
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"Repository": "RSPM"
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"Repository": "CRAN"
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},
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"tidyr": {
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"Package": "tidyr",
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},
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"utf8": {
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"Package": "utf8",
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"Version": "1.2.5",
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"Version": "1.2.6",
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"Source": "Repository",
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"Title": "Unicode Text Processing",
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"Authors@R": "c(person(given = c(\"Patrick\", \"O.\"), family = \"Perry\", role = c(\"aut\", \"cph\")), person(given = \"Kirill\", family = \"M\\u00fcller\", role = \"cre\", email = \"kirill@cynkra.com\"), person(given = \"Unicode, Inc.\", role = c(\"cph\", \"dtc\"), comment = \"Unicode Character Database\"))",
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"Authors@R": "c(person(given = c(\"Patrick\", \"O.\"), family = \"Perry\", role = c(\"aut\", \"cph\")), person(given = \"Kirill\", family = \"M\\u00fcller\", role = \"cre\", email = \"kirill@cynkra.com\", comment = c(ORCID = \"0000-0002-1416-3412\")), person(given = \"Unicode, Inc.\", role = c(\"cph\", \"dtc\"), comment = \"Unicode Character Database\"))",
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"Description": "Process and print 'UTF-8' encoded international text (Unicode). Input, validate, normalize, encode, format, and display.",
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"License": "Apache License (== 2.0) | file LICENSE",
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"URL": "https://ptrckprry.com/r-utf8/, https://github.com/patperry/r-utf8",
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"BugReports": "https://github.com/patperry/r-utf8/issues",
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"URL": "https://krlmlr.github.io/utf8/, https://github.com/krlmlr/utf8",
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"BugReports": "https://github.com/krlmlr/utf8/issues",
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"Depends": [
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"R (>= 2.10)"
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],
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"Encoding": "UTF-8",
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"RoxygenNote": "7.3.2.9000",
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"NeedsCompilation": "yes",
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"Author": "Patrick O. Perry [aut, cph], Kirill Müller [cre], Unicode, Inc. [cph, dtc] (Unicode Character Database)",
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"Author": "Patrick O. Perry [aut, cph], Kirill Müller [cre] (ORCID: <https://orcid.org/0000-0002-1416-3412>), Unicode, Inc. [cph, dtc] (Unicode Character Database)",
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"Maintainer": "Kirill Müller <kirill@cynkra.com>",
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"Repository": "CRAN"
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},

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