differences for PR #21

Author: actions-user

config.yaml

@@ -0,0 +1,87 @@
+#------------------------------------------------------------
+# Values for this lesson.
+#------------------------------------------------------------
+
+# Which carpentry is this (swc, dc, lc, or cp)?
+# swc: Software Carpentry
+# dc: Data Carpentry
+# lc: Library Carpentry
+# cp: Carpentries (to use for instructor training for instance)
+# incubator: The Carpentries Incubator
+carpentry: 'epiverse-trace'
+
+# Overall title for pages.
+title: 'Analyse et prévisions en temps réel des épidémies avec R'
+
+# Date the lesson was created (YYYY-MM-DD, this is empty by default)
+created:
+
+# Comma-separated list of keywords for the lesson
+keywords: 'forecasts, epidemic models, interventions'
+
+# Life cycle stage of the lesson
+# possible values: pre-alpha, alpha, beta, stable
+life_cycle: 'pre-alpha'
+
+# License of the lesson materials (recommended CC-BY 4.0)
+license: 'CC-BY 4.0'
+
+# Link to the source repository for this lesson
+source: 'https://github.com/epiverse-trace/tutorials-middle-fr'
+
+# Default branch of your lesson
+branch: 'main'
+
+# Who to contact if there are any issues
+contact: 'andree.valle-campos@lshtm.ac.uk'
+
+# Navigation ------------------------------------------------
+#
+# Use the following menu items to specify the order of
+# individual pages in each dropdown section. Leave blank to
+# include all pages in the folder.
+#
+# Example -------------
+#
+# episodes:
+# - introduction.md
+# - first-steps.md
+#
+# learners:
+# - setup.md
+#
+# instructors:
+# - instructor-notes.md
+#
+# profiles:
+# - one-learner.md
+# - another-learner.md
+
+# Order of episodes in your lesson
+episodes:
+- delays-access.Rmd
+- quantify-transmissibility.Rmd
+- delays-functions.Rmd
+- create-forecast.Rmd
+- severity-static.Rmd
+- superspreading-estimate.Rmd
+- superspreading-simulate.Rmd
+
+# Information for Learners
+learners:
+
+# Information for Instructors
+instructors:
+
+# Learner Profiles
+profiles:
+
+# Customisation ---------------------------------------------
+#
+# This space below is where custom yaml items (e.g. pinning
+# sandpaper and varnish versions) should live
+
+
+varnish: epiverse-trace/varnish@epiversetheme
+sandpaper: epiverse-trace/sandpaper@patch-renv-github-bug
+lang: fr

fig/superspreading-estimate-rendered-unnamed-chunk-10-1.png

@@ -8,8 +8,8 @@
 "episodes/quantify-transmissibility.Rmd" "e6b6eff8139d8c2914ffee015abe6007" "site/built/quantify-transmissibility.md" "2025-11-11"
 "episodes/delays-functions.Rmd" "7d711f0376460a2f4ffbe202bc0d8165" "site/built/delays-functions.md" "2025-11-11"
 "episodes/create-forecast.Rmd" "8c78822c6f5b11787123356aa13fff94" "site/built/create-forecast.md" "2025-11-11"
-"episodes/severity-static.Rmd" "c6f30835be8b1e36b9b8ce78190f412f" "site/built/severity-static.md" "2025-11-11"
-"episodes/superspreading-estimate.Rmd" "c456aec9bbe9a8be4659ff3c2651cc9d" "site/built/superspreading-estimate.md" "2025-11-11"
+"episodes/severity-static.Rmd" "312706ebec05e9bf0e3aeffb8cfa56e8" "site/built/severity-static.md" "2025-11-14"
+"episodes/superspreading-estimate.Rmd" "7000c495187ff7a96872dd97dfab67fb" "site/built/superspreading-estimate.md" "2025-11-14"
 "episodes/superspreading-simulate.Rmd" "1da2ca05aed9fe5d8a0e9dd9f0a3d35d" "site/built/superspreading-simulate.md" "2025-11-11"
 "instructors/instructor-notes.md" "ca3834a1b0f9e70c4702aa7a367a6bb5" "site/built/instructor-notes.md" "2025-11-11"
 "learners/reference.md" "9aada1c331ee11f38e078457ba343c62" "site/built/reference.md" "2025-11-11"

fig/superspreading-estimate-rendered-unnamed-chunk-13-1.png

@@ -42,11 +42,8 @@ Installer les packages si elles ne le sont pas déjà:
 
 
 ``` r
-# si {pak} n'est pas disponible, exécutez : install.packages("pak")
-pak::pak("cfr")
-pak::pak("epiparameter")
-pak::pak("tidyverse")
-pak::pak("outbreaks")
+if(!require("pak")) install.packages("pak")
+pak::pak(c("cfr", "epiparameter", "tidyverse", "outbreaks"))
 ```
 
 Si vous recevez un message d'erreur, rendez-vous sur la [page principale de configuration](../learners/setup.md#configuration-des-logiciels).