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parameters_model.py
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195 lines (170 loc) · 6.6 KB
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from typing import Any, List, Tuple
import numpy as np
import pandas as pd
import plotly.graph_objects as go
from webviz_subsurface._figures import create_figure
from webviz_subsurface._models.parameter_model import ParametersModel as Pmodel
class ParametersModel:
"""Class to process and visualize ensemble parameter data"""
REQUIRED_COLUMNS = ["ENSEMBLE", "REAL"]
def __init__(
self, dataframe: pd.DataFrame, theme: dict, drop_constants: bool = True
) -> None:
self.pmodel = Pmodel(
dataframe=dataframe, drop_constants=drop_constants, keep_numeric_only=True
)
self._dataframe = self.pmodel.dataframe
self._dataframe["REAL"] = self._dataframe["REAL"].astype(int)
self._parameters = self.pmodel.parameters
self.theme = theme
self.colorway = self.theme.plotly_theme.get("layout", {}).get("colorway", None)
self._statframe = self._aggregate_ensemble_data(self._dataframe)
self._statframe_normalized = self._normalize_and_aggregate()
self._dataframe_melted = self.dataframe.melt(
id_vars=["ENSEMBLE", "REAL"], var_name="PARAMETER", value_name="VALUE"
)
@property
def dataframe_melted(self) -> pd.DataFrame:
return self._dataframe_melted
@property
def dataframe(self) -> pd.DataFrame:
return self._dataframe
@property
def statframe(self) -> pd.DataFrame:
return self._statframe
@property
def mc_ensembles(self) -> pd.DataFrame:
return self.pmodel.mc_ensembles
@property
def parameters(self) -> pd.DataFrame:
return self._parameters
@parameters.setter
def parameters(self, sortorder):
self._parameters = sortorder
@property
def ensembles(self) -> List[str]:
return list(self.dataframe["ENSEMBLE"].unique())
@staticmethod
def _aggregate_ensemble_data(dframe) -> pd.DataFrame:
"""Compute parameter statistics for the different ensembles"""
return (
dframe.drop(columns=["REAL"])
.groupby(["ENSEMBLE"])
.agg(
[
("Avg", np.mean),
("Stddev", np.std),
("P10", lambda x: np.percentile(x, 10)),
("P90", lambda x: np.percentile(x, 90)),
("Min", np.min),
("Max", np.max),
]
)
.stack(0)
.rename_axis(["ENSEMBLE", "PARAMETER"])
.reset_index()
)
def _normalize_and_aggregate(self):
"""
Normalize parameter values to be able to compare distribution updates
for different parameters
"""
df = self._dataframe.copy()
df_norm = (df[self.parameters] - df[self.parameters].min()) / (
df[self.parameters].max() - df[self.parameters].min()
)
df_norm[self.REQUIRED_COLUMNS] = df[self.REQUIRED_COLUMNS]
df = self._aggregate_ensemble_data(df_norm)
return df.pivot_table(columns=["ENSEMBLE"], index="PARAMETER").reset_index()
def sort_parameters(
self,
ensemble: str,
delta_ensemble: str,
sortby: str,
):
"""Sort parameter list from selection"""
# compute diff between ensembles
df = self._statframe_normalized.copy()
df["Avg", "diff"] = abs(df["Avg"][ensemble] - df["Avg"][delta_ensemble])
df["Stddev", "diff"] = df["Stddev"][ensemble] - df["Stddev"][delta_ensemble]
# set parameter column and update parameter list
df = df.sort_values(
by="PARAMETER" if sortby == "Name" else [(sortby, "diff")],
ascending=(sortby == "Name"),
)
self._parameters = list(df["PARAMETER"])
return list(df["PARAMETER"])
@staticmethod
def make_table(df: pd.DataFrame) -> Tuple[List[Any], List[Any]]:
"""Return format needed for dash table"""
col_order = ["PARAMETER", "Avg", "Stddev", "P90", "P10", "Min", "Max"]
df = df.reindex(col_order, axis=1, level=0)
df.columns = df.columns.map("|".join)
columns = [
{
"id": col,
"name": [col.split("|")[0], col.split("|")[1]],
"type": "numeric",
"format": {"specifier": ".5~r"},
}
for col in df.columns
]
return columns, df.to_dict("records")
def _sort_parameters_col(self, df, parameters):
"""Sort parameter column in dataframe"""
sortorder = [x for x in self._parameters if x in parameters]
return df.set_index("PARAMETER").loc[sortorder].reset_index()
def make_statistics_table(
self,
ensembles: list,
parameters: List[Any],
) -> Tuple[List[Any], List[Any]]:
"""Create table with statistics for selected parameters"""
df = self.statframe.copy()
df = df[df["ENSEMBLE"].isin(ensembles)]
df = df[df["PARAMETER"].isin(parameters)]
df = df.pivot_table(columns=["ENSEMBLE"], index="PARAMETER").reset_index()
df = self._sort_parameters_col(df, parameters)
return self.make_table(df)
def make_grouped_plot(
self,
ensembles: list,
parameters: List[Any],
plot_type: str = "distribution",
) -> go.Figure:
"""Create subplots for selected parameters"""
df = self.dataframe_melted.copy()
df = df[df["ENSEMBLE"].isin(ensembles)]
df = df[df["PARAMETER"].isin(parameters)]
df = self._sort_parameters_col(df, parameters)
return (
create_figure(
plot_type=plot_type,
data_frame=df,
x="VALUE",
facet_col="PARAMETER",
color="ENSEMBLE",
color_discrete_sequence=self.colorway,
)
.update_xaxes(matches=None)
.for_each_trace(
lambda t: t.update(
text=t["text"].replace("VALUE", "")
if t["text"] is not None
else None
)
)
)
def get_stat_value(self, parameter: str, ensemble: str, stat_column: str):
"""
Retrive statistical value for a parameter in an ensamble.
"""
return self.statframe.loc[
(self.statframe["PARAMETER"] == parameter)
& (self.statframe["ENSEMBLE"] == ensemble)
].iloc[0][stat_column]
def get_parameter_df_for_ensemble(self, ensemble: str, reals: list):
return self._dataframe[
(self._dataframe["ENSEMBLE"] == ensemble)
& (self._dataframe["REAL"].isin(reals))
]