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Update run.md
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docs/software/container-engine/run.md

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@@ -33,7 +33,7 @@ The supported approach is to use `--environment` as part of the Slurm command (e
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# Run job step
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srun --environment=debian cat /etc/os-release
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srun --environment=ubuntu cat /etc/os-release
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```
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Alternatively, the `--environment` option can also be specified with an `#SBATCH` option.
@@ -54,7 +54,7 @@ If an EDF is located in the search path, its name can be used in the `--environm
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!!! example "Using `EDF_PATH` to control the default search path"
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```console
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$ ls ~/.edf
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debian.toml
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ubuntu.toml
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$ ls ~/example-project
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fedora-env.toml
@@ -93,6 +93,8 @@ To do so, users may execute `enroot import docker://[REGISTRY#]IMAGE[:TAG]` to p
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After the import is complete, images are available in Squashfs format in the current directory and can be used in EDFs:
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!!! example "Manually pulling an `nvidia/cuda:11.8.0-cudnn8-devel-ubuntu22.04` image"
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1. Pull the image.
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```console
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$ cd ${SCRATCH}
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$ enroot import docker://nvidia/cuda:11.8.0-cudnn8-devel-ubuntu22.04
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$ ls *.sqsh
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nvidia+cuda+11.8.0-cudnn8-devel-ubuntu22.04.sqsh
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```
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2. Create an EDF referencing the pulled image.
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$ cat ${HOME}/.edf/example.toml # (1)
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```bash
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image = "/capstor/scratch/cscs/${USER}/nvidia+cuda+11.8.0-cudnn8-devel-ubuntu22.04.sqsh"
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```
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1. Assuming `example.toml` is already written at `${HOME}/.edf`.
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!!! note
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It is recommended to save images in `/capstor/scratch/cscs/${USER}` or its subdirectories before using them.
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