Merge branch 'main' into mlp-tutorials-update

Author: lukasgd

docs/guides/terminal.md

@@ -8,26 +8,24 @@ This documentation is a collection of guides, hints, and tips for setting up you
 
 Every user has a shell that will be used when they log in, with [bash](https://www.gnu.org/software/bash/) as the default shell for new users at CSCS.
 
-At CSCS the vast majority of users stick with the default `bash`: at the time of writing, of over 1000 users on Daint, over 99% were using bash.
-
 !!! example "Which shell am I using?"
 
     Run the following command after logging in:
 
     ```console
-    $ getent passwd | grep $USER
-    bcumming:*:22008:1000:Benjamin Cumming, CSCS:/users/bcumming:/usr/local/bin/bash
+    $ echo $SHELL
+    /usr/local/bin/bash
     ```
 
-    The last entry in the output points to the shell of the user, in this case `/usr/local/bin/bash`.
-
 !!! tip
     If you would like to change your shell, for example to [zsh](https://www.zsh.org), you have to open a [service desk](https://jira.cscs.ch/plugins/servlet/desk) ticket to request the change. You can't make the change yourself.
 
 
 !!! warning
-    Because `bash` is used by all CSCS staff and the overwhelming majority of users, it is the best tested, and safest default.
-
+    If you are comfortable with another shell (like Zsh or Fish), you are welcome to switch.
+    Just keep in mind that some tools and instructions might not work the same way outside of `bash`.
+    Since our support and documentation are based on the default setup, using a different shell might make it harder to follow along or get help.
+    
     We strongly recommend against using cshell - tools like uenv are not tested against it.
 
 [](){#ref-guides-terminal-arch}

docs/software/container-engine/run.md

@@ -15,7 +15,7 @@ There are three ways to do so:
     $ srun --environment=./.edf/ubuntu.toml echo "Hello"    # from ${HOME}. 
     ```
 
- 3. **From EDF search paths**: the name of EDF in the [EDF search path][ref-ce-edf-search-path]. `--environment` also accepts the EDF filename without the `.toml` extension:
+ 3. **From EDF search paths**: the name of EDF in the [EDF search path][ref-ce-edf-search-path]. Notice that in this way, `--environment` accepts the EDF filename **without** the `.toml` extension.
 
     ```console 
     $ srun --environment=ubuntu echo "Hello" 

docs/software/sciapps/cp2k.md

@@ -15,6 +15,9 @@ transition state optimization using NEB or dimer method. See [CP2K Features] for
     [CP2K] is provided on [ALPS][platforms-on-alps] via [uenv][ref-uenv].
     Please have a look at the [uenv documentation][ref-uenv] for more information about uenvs and how to use them.
 
+!!! warning "Known issues"
+    Please check CP2K's [known issues](#known-issues) and whether they are relevant to your work. They may impact your calculations in subtle ways, potentially leading to a waste of resources.
+
 ??? note "Changelog"
 
     ??? note "2025.1"