Updated issue
Bootupd is now included and enabled by default on Atomic Desktops: https://fedoraproject.org/wiki/Changes/FedoraSilverblueBootupd
The duplicate entry part of this issue remains and will be fixed once we move to a static GRUB config. This should happen alongside the composefs migration. See: https://gitlab.com/fedora/ostree/sig/-/issues/35
Original issue

F33, ThinkPad T495s