Skip to content

Commit 1ef902d

Browse files
committed
update examples table with links
1 parent 1600f8c commit 1ef902d

File tree

1 file changed

+69
-69
lines changed

1 file changed

+69
-69
lines changed

doc/neurodata_types.md

Lines changed: 69 additions & 69 deletions
Original file line numberDiff line numberDiff line change
@@ -2,72 +2,72 @@
22

33
The goal is to eventually support all data types with plugins.
44

5-
|Neurodata Type|Parent Type|Neurosift Plugin|
6-
|--------------|-----------|----------------|
7-
|AbstractFeatureSeries|TimeSeries|From TimeSeries|
8-
|AnnotatedEventsTable|Units|From Units|
9-
|AnnotationSeries|TimeSeries|From TimeSeries|
10-
|BehavioralEpochs|NWBDataInterface||
11-
|BehavioralEvents|NWBDataInterface|BehavioralEvents|
12-
|BehavioralTimeSeries|NWBDataInterface||
13-
|Clustering|NWBDataInterface||
14-
|ClusterWaveforms|NWBDataInterface||
15-
|CompassDirection|NWBDataInterface||
16-
|CorrectedImageStack|NWBDataInterface||
17-
|CurrentClampSeries|PatchClampSeries||
18-
|CurrentClampStimulusSeries|PatchClampSeries||
19-
|DecompositionSeries|TimeSeries|From TimeSeries|
20-
|Device|NWBContainer||
21-
|DfOverF|NWBDataInterface||
22-
|ElectricalSeries|TimeSeries|ElectricalSeries|
23-
|ElectrodeGroup|NWBContainer||
24-
|EventDetection|NWBDataInterface||
25-
|EventWaveform|NWBDataInterface||
26-
|EyeTracking|NWBDataInterface||
27-
|FeatureExtraction|NWBDataInterface||
28-
|FilteredEphys|NWBDataInterface||
29-
|Fluorescence|NWBDataInterface||
30-
|GrayscaleImage|Image||
31-
|Image|NWBData||
32-
|ImageMaskSeries|ImageSeries|From ImageSeries|
33-
|Images|NWBDataInterface|Images|
34-
|ImageSegmentation|NWBDataInterface|ImageSegmentation|
35-
|ImageSeries|TimeSeries|ImageSeries|
36-
|ImagingPlane|NWBContainer||
37-
|ImagingRetinotopy|NWBDataInterface||
38-
|IndexSeries|TimeSeries|From TimeSeries|
39-
|IntervalSeries|TimeSeries|From TimeSeries|
40-
|IntracellularElectrode|NWBContainer||
41-
|IZeroClampSeries|CurrentClampSeries||
42-
|LabMetaData|NWBContainer||
43-
|LFP|NWBDataInterface||
44-
|LabeledEvents||LabeledEvents|
45-
|MotionCorrection|NWBDataInterface||
46-
|NWBContainer|Container||
47-
|NWBData|Data||
48-
|NWBDataInterface|NWBContainer||
49-
|NWBFile|NWBContainer||
50-
|OnePhotonSeries|ImageSeries|OnePhotonSeries|
51-
|OpticalChannel|NWBContainer||
52-
|OpticalSeries|ImageSeries||
53-
|OptogeneticSeries|TimeSeries|From TimeSeries|
54-
|OptogeneticStimulusSite|NWBContainer||
55-
|PatchClampSeries|TimeSeries|From TimeSeries|
56-
|PlaneSegmentation|DynamicTable|From DynamicTable|
57-
|Position|NWBDataInterface||
58-
|ProcessingModule|NWBContainer||
59-
|PupilTracking|NWBDataInterface||
60-
|RGBAImage|Image||
61-
|RGBImage|Image||
62-
|RoiResponseSeries|TimeSeries|From TimeSeries|
63-
|ScratchData|NWBData||
64-
|SpatialSeries|TimeSeries|SpatialSeries and SpatialSeriesXYView|
65-
|SpikeEventSeries|ElectricalSeries|From ElectricalSeries|
66-
|Subject|NWBContainer||
67-
|SweepTable|DynamicTable|From DynamicTable|
68-
|TimeIntervals|DynamicTable|TimeIntervals, PSTH, TimeAlignedSeries|
69-
|TimeSeries|NWBDataInterface|TimeSeries|
70-
|TwoPhotonSeries|ImageSeries|TwoPhotonSeries|
71-
|Units|DynamicTable|Units, RasterPlot, AverageWaveforms, Autocorrelograms|
72-
|VoltageClampSeries|PatchClampSeries||
73-
|VoltageClampStimulusSeries|PatchClampSeries||
5+
|Neurodata Type|Parent Type|Neurosift Plugin|Example|
6+
|--------------|-----------|----------------|-------|
7+
|AbstractFeatureSeries|TimeSeries|From TimeSeries||
8+
|AnnotatedEventsTable|Units|From Units||
9+
|AnnotationSeries|TimeSeries|From TimeSeries||
10+
|BehavioralEpochs|NWBDataInterface|||
11+
|BehavioralEvents|NWBDataInterface|BehavioralEvents|[example](https://neurosift.app/?p=/nwb&dandisetId=000629&dandisetVersion=draft&url=https://api.dandiarchive.org/api/assets/efe22650-8f8b-48ac-85c8-2d5a42c00744/download/&tab=neurodata-item:/processing/behavior/behavioral_events\|BehavioralEvents)|
12+
|BehavioralTimeSeries|NWBDataInterface|||
13+
|Clustering|NWBDataInterface|||
14+
|ClusterWaveforms|NWBDataInterface|||
15+
|CompassDirection|NWBDataInterface|||
16+
|CorrectedImageStack|NWBDataInterface|||
17+
|CurrentClampSeries|PatchClampSeries|||
18+
|CurrentClampStimulusSeries|PatchClampSeries|||
19+
|DecompositionSeries|TimeSeries|From TimeSeries||
20+
|Device|NWBContainer|||
21+
|DfOverF|NWBDataInterface|||
22+
|ElectricalSeries|TimeSeries|ElectricalSeries|[example](https://neurosift.app/?p=/nwb&dandisetId=000947&dandisetVersion=draft&url=https://api.dandiarchive.org/api/assets/766438c5-fa8c-42a5-bd26-41c8a89be93a/download/&tab=neurodata-item:/acquisition/ElectricalSeries\|ElectricalSeries)|
23+
|ElectrodeGroup|NWBContainer|||
24+
|EventDetection|NWBDataInterface|||
25+
|EventWaveform|NWBDataInterface|||
26+
|EyeTracking|NWBDataInterface|||
27+
|FeatureExtraction|NWBDataInterface|||
28+
|FilteredEphys|NWBDataInterface|||
29+
|Fluorescence|NWBDataInterface|||
30+
|GrayscaleImage|Image|||
31+
|Image|NWBData|||
32+
|ImageMaskSeries|ImageSeries|From ImageSeries||
33+
|Images|NWBDataInterface|Images|[example](https://neurosift.app/?p=/nwb&dandisetId=000957&dandisetVersion=0.240407.0142&url=https://api.dandiarchive.org/api/assets/ce047d88-95b3-4169-a63b-e30a4f35d86e/download/&tab=neurodata-item:/stimulus/templates/template_118_images\|Images)|
34+
|ImageSegmentation|NWBDataInterface|ImageSegmentation|[example](https://neurosift.app/?p=/nwb&url=https://dandiarchive.s3.amazonaws.com/blobs/368/fa7/368fa71e-4c93-4f7e-af15-06776ca07f34&tab=neurodata-item:/processing/ophys/ImageSegmentation%7CImageSegmentation)|
35+
|ImageSeries|TimeSeries|||
36+
|ImagingPlane|NWBContainer|||
37+
|ImagingRetinotopy|NWBDataInterface|||
38+
|IndexSeries|TimeSeries|From TimeSeries|[example](http://localhost:4200/?p=/nwb&dandisetId=000957&dandisetVersion=0.240407.0142&url=https://api.dandiarchive.org/api/assets/d4bd92fc-4119-4393-b807-f007a86778a1/download/&tab=neurodata-item:/stimulus/presentation/pre_motion_stim_index\|IndexSeries)|
39+
|IntervalSeries|TimeSeries|From TimeSeries||
40+
|IntracellularElectrode|NWBContainer|||
41+
|IZeroClampSeries|CurrentClampSeries|||
42+
|LabMetaData|NWBContainer|||
43+
|LFP|NWBDataInterface|||
44+
|LabeledEvents||||
45+
|MotionCorrection|NWBDataInterface|||
46+
|NWBContainer|Container|||
47+
|NWBData|Data|||
48+
|NWBDataInterface|NWBContainer|||
49+
|NWBFile|NWBContainer|||
50+
|OnePhotonSeries|ImageSeries|OnePhotonSeries|[example](https://neurosift.app/?p=/nwb&dandisetId=000935&dandisetVersion=0.240319.2026&url=https://api.dandiarchive.org/api/assets/6b9ac40b-4a63-4406-a03f-99f649d9fabe/download/&tab=neurodata-item:/acquisition/1pInternal\|OnePhotonSeries)|
51+
|OpticalChannel|NWBContainer|||
52+
|OpticalSeries|ImageSeries|||
53+
|OptogeneticSeries|TimeSeries|From TimeSeries||
54+
|OptogeneticStimulusSite|NWBContainer|||
55+
|PatchClampSeries|TimeSeries|From TimeSeries||
56+
|PlaneSegmentation|DynamicTable|From DynamicTable||
57+
|Position|NWBDataInterface|||
58+
|ProcessingModule|NWBContainer|||
59+
|PupilTracking|NWBDataInterface|||
60+
|RGBAImage|Image|||
61+
|RGBImage|Image|||
62+
|RoiResponseSeries|TimeSeries|From TimeSeries||
63+
|ScratchData|NWBData|||
64+
|SpatialSeries|TimeSeries|SpatialSeries and SpatialSeriesXYView|[example](https://neurosift.app/?p=/nwb&url=https://dandiarchive.s3.amazonaws.com/blobs/c86/cdf/c86cdfba-e1af-45a7-8dfd-d243adc20ced&tab=neurodata-items:neurodata-item:/acquisition/position_sensor0%7CSpatialSeries@view:X/Y%7C/acquisition/position_sensor0&tab-time=0,384,117.50619637750238)|
65+
|SpikeEventSeries|ElectricalSeries|From ElectricalSeries||
66+
|Subject|NWBContainer|||
67+
|SweepTable|DynamicTable|From DynamicTable||
68+
|TimeIntervals|DynamicTable|TimeIntervals, PSTH, TimeAlignedSeries|[time-intervals-example](https://neurosift.app/?p=/nwb&url=https://dandiarchive.s3.amazonaws.com/blobs/cae/e8f/caee8f64-ebeb-439d-a3f4-e3380699b49f&tab=neurodata-item:/intervals/trials%7CTimeIntervals), [psth-example](https://neurosift.app/?p=/nwb&url=https://dandiarchive.s3.amazonaws.com/blobs/df3/e3f/df3e3f73-50ab-42b4-8827-82664ddd474a&tab=view:PSTH%7C/intervals/trials)|
69+
|TimeSeries|NWBDataInterface|TimeSeries|[example](https://neurosift.app/?p=/nwb&url=https://dandiarchive.s3.amazonaws.com/blobs/c86/cdf/c86cdfba-e1af-45a7-8dfd-d243adc20ced&tab=neurodata-item:/acquisition/ch_SsolL%7CTimeSeries&tab-time=43.82871078730636,95.27484222730642,72.51887941685835)|
70+
|TwoPhotonSeries|ImageSeries|TwoPhotonSeries|[example](https://neurosift.app/?p=/nwb&dandisetId=000951&dandisetVersion=0.240418.2218&url=https://api.dandiarchive.org/api/assets/7f4fbb15-ff41-4eb9-b556-39000f259dcf/download/&tab=neurodata-item:/acquisition/TwoPhotonSeries\|TwoPhotonSeries)|
71+
|Units|DynamicTable|Units, RasterPlot, AverageWaveforms, Autocorrelograms|[raster-plot-example](https://neurosift.app/?p=/nwb&url=https://dandiarchive.s3.amazonaws.com/blobs/a63/6de/a636de8b-7c90-4a41-94be-9da3de53cf82&tab=view:DirectRasterPlot\|/units), [average-waveforms-example](https://neurosift.app/?p=/nwb&url=https://neurosift.org/dendro-outputs/d02200fd.e19adcf8/output&dandisetId=000939&dandisetVersion=0.240327.2229&dandiAssetId=56d875d6-a705-48d3-944c-53394a389c85&st=lindi&tab=view:AverageWaveforms\|/units), [autocorrelograms-example](https://neurosift.app/?p=/nwb&url=https://neurosift.org/dendro-outputs/d02200fd.e19adcf8/output&dandisetId=000939&dandisetVersion=0.240327.2229&dandiAssetId=56d875d6-a705-48d3-944c-53394a389c85&st=lindi&tab=view:Autocorrelograms\|/units)|
72+
|VoltageClampSeries|PatchClampSeries|||
73+
|VoltageClampStimulusSeries|PatchClampSeries|||

0 commit comments

Comments
 (0)