diff --git a/.github/workflows/update-flatpak-builder-docs.yml b/.github/workflows/update-flatpak-builder-docs.yml
index a78205d2..1f32629f 100644
--- a/.github/workflows/update-flatpak-builder-docs.yml
+++ b/.github/workflows/update-flatpak-builder-docs.yml
@@ -28,6 +28,7 @@ jobs:
       - name: Move docs
         run: |
           cp -vf usr/share/doc/flatpak-builder/flatpak-builder-docs.html docs/
+          rm -rf usr/
 
       - name: Get new docs version
         run: |
diff --git a/.github/workflows/update-flatpak-docs.yml b/.github/workflows/update-flatpak-docs.yml
index 0c304f73..7411a061 100644
--- a/.github/workflows/update-flatpak-docs.yml
+++ b/.github/workflows/update-flatpak-docs.yml
@@ -28,6 +28,7 @@ jobs:
       - name: Move docs
         run: |
           cp -vf usr/share/doc/flatpak/flatpak-docs.html docs/
+          rm -rf usr/
 
       - name: Get new docs version
         run: |