Skip to content

Colour alignments by percentage identity #29

Description

@Adamtaranto

Add support for colouring alignments by percentage identity as in mummerplot and D-Genies.

  • Easy enough for blast6 input, identity exists
  • Might need to approximate from PAF col 10 Number of residue matches and alignment length.
  • Not viable for k-mers or regex based methods
  • Select appropriate colour palette or palette options
  • Add legend with colour gradient and corresponding % identity

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

Labels

enhancementNew feature or request

Projects

No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions