Merge pull request #5724 from grondo/flux-hostlist

add flux-hostlist(1)

Author: mergify[bot]

doc/Makefile.am

@@ -54,7 +54,8 @@ MAN1_FILES_PRIMARY = \
 	man1/flux-pgrep.1 \
 	man1/flux-cancel.1 \
 	man1/flux-watch.1 \
-	man1/flux-update.1
+	man1/flux-update.1 \
+	man1/flux-hostlist.1
 
 # These files are generated as clones of a primary page.
 # Sphinx handles this automatically if declared in the conf.py

doc/man1/flux-hostlist.rst

@@ -0,0 +1,219 @@
+.. flux-help-section: other
+
+================
+flux-hostlist(1)
+================
+
+SYNOPSIS
+========
+
+**flux** **hostlist** [*OPTIONS*] [*SOURCES*]
+
+DESCRIPTION
+===========
+
+.. program:: flux hostlist
+
+:program:`flux hostlist` takes zero or more *SOURCES* of host lists on the
+command line and concatenates them by default into a single RFC 29 Hostlist.
+
+*SOURCES* can optionally be combined by various set operations, for example
+to find the intersection, difference, or to subtract hostlists.
+
+SOURCES
+=======
+
+Valid *SOURCES* of hostlist information include:
+
+instance
+  hosts from the broker ``hostlist`` attribute
+
+jobid
+  hosts assigned to a job.
+
+local
+  *jobid* from ``FLUX_JOB_ID`` environment variable if set, otherwise
+  *instance*
+
+avail[able]
+  *instance* hostlist minus those nodes down or drained
+
+stdin or ``-``
+  read a list of hosts on stdin
+
+hosts
+  a literal RFC 29 Hostlist
+
+The default source is *local*.
+
+OPTIONS
+=======
+
+.. option:: -e, --expand
+
+  Expand hostlist result using the defined output delimiter. Default is
+  space-delimited.
+
+.. option:: -d, --delimiter=S
+
+  Set the delimiter for :option:`--expand` to string *S*.
+
+.. option:: -c, --count
+
+  Emit the number of hosts in the result hostlist instead of the hostlist
+  itself.
+
+.. option:: -n, --nth=N
+
+  Output only the host at index *N* (*-N* to index from the end). The command
+  will fail if *N* is not a valid index.
+
+.. option:: -L, --limit=N
+
+  Output at most *N* hosts (*-N* to output the last *N* hosts).
+
+.. option:: -S, --sort
+
+  Display sorted result.
+
+.. option:: -u, --union, --unique
+
+  Return only unique hosts. This implies :option:`--sort`. Without any
+  other manipulation options, this is equivalent to returning the set
+  union of all provided hosts. (By default, all inputs are concatenated).
+
+.. option:: -x, --exclude=HOSTS
+
+  Exclude all occurrences of *HOSTS* form the result.
+
+.. option:: -i, --intersect
+
+  Return the set intersection of all hostlists.
+
+.. option:: -m, --minus
+
+  Subtract all hostlists from the first.
+
+.. option:: -X, --xor
+
+  Return the symmetric difference of all hostlists.
+
+.. option:: -f, --fallback
+
+  If an argument to :command:`flux-hostlist` is a single hostname, and the
+  hostname can be interpreted as a valid Flux jobid (e.g. starts with ``f``
+  and otherwise contains valid base58 characters like ``fuzzy`` or ``foo1``),
+  then the command may fail with::
+
+    flux-hostlist: ERROR: job foo1 not found
+
+  With the :option:`--fallback` option arguments that appear to be jobids that
+  are not found are treated as hostnames, e.g.::
+ 
+    $ flux hostlist --fallback foo1 foo2
+    foo[1-2]
+  
+.. option:: -q, --quiet
+
+  Suppress output and exit with a nonzero exit code if the hostlist is empty.
+
+EXAMPLES
+========
+
+Create host file for the current job or instance if running in an initial
+program:
+
+::
+
+  $ flux hostlist -ed'\n' >hostfile
+
+Launch an MPI program using :program:`mpiexec.hydra` from within a batch
+script:
+
+::
+
+  #!/bin/sh
+  mpiexec.hydra -launcher ssh -hosts "$(flux hostlist -e)" mpi_hello
+
+List the hosts for one job: (Note: this is the same as
+:command:`flux jobs -no {nodelist} JOBID`)
+
+::
+
+  $ flux hostlist JOBID
+  host[1-2]
+
+List the unordered, unique hosts for multiple jobs:
+
+::
+
+  $ flux hostlist -u JOBID1 JOBID2 JOBID3
+  host[1-2,4]
+
+Determine if any failed jobs shared common nodes:
+
+::
+
+  $ flux hostlist --intersect $(flux jobs -f failed -no {id})
+  host4
+
+Determine if a given host appeared the last submitted job:
+
+::
+
+  if flux hostlist -q -i $(flux job last) host1; then
+      echo host1 was part of your last job
+  fi
+
+
+Count the number of currently available hosts:
+
+::
+
+  $ flux hostlist --count avail
+  4
+
+List all the hosts on which a job named 'myapp' ran:
+
+::
+
+  $ flux hostlist --union $(flux pgrep myapp)
+  host[2,4-5]
+
+List all hosts in the current instance which haven't had a job assigned
+in the last 100 jobs:
+
+::
+
+  $ flux hostlist --minus instance $(flux jobs -c 100 -ano {id})
+  host0
+
+EXIT STATUS
+===========
+
+0
+  Successful operation
+
+1
+  One or more *SOURCES* were invalid, an invalid index was specified to
+  :option:`--nth`, or :option:`--quiet` was used and the result hostlist
+  was empty.
+
+2
+  Invalid option specified or other command line error
+
+RESOURCES
+=========
+
+.. include:: common/resources.rst
+  
+FLUX RFC
+========
+
+:doc:`rfc:spec_29`
+
+
+SEE ALSO
+========
+
+:man1:`flux-getattr`, :man1:`flux-jobs`, :man7:`flux-broker-attributes`

doc/manpages.py

@@ -69,6 +69,7 @@
     ('man1/flux-shell', 'flux-shell', 'the Flux job shell', [author], 1),
     ('man1/flux-watch', 'flux-watch', 'monitor one or more Flux jobs', [author], 1),
     ('man1/flux-update', 'flux-update', 'update active Flux jobs', [author], 1),
+    ('man1/flux-hostlist', 'flux-hostlist', 'fetch, combine, and manipulate Flux hostlists', [author], 1),
     ('man3/flux_attr_get', 'flux_attr_set', 'get/set Flux broker attributes', [author], 3),
     ('man3/flux_attr_get', 'flux_attr_get', 'get/set Flux broker attributes', [author], 3),
     ('man3/flux_aux_set', 'flux_aux_get', 'get/set auxiliary handle data', [author], 3),

doc/test/spell.en.pws

@@ -824,3 +824,6 @@ infeasible
 login
 workflow
 xmlfile
+hostfile
+ano
+myapp

src/bindings/python/flux/util.py

@@ -123,7 +123,7 @@ def encode_topic(topic):
     return topic
 
 
-def help_formatter(argwidth=40):
+def help_formatter(argwidth=40, raw_description=False):
     """
     Return our 'clean' HelpFormatter, if possible, with a wider default
      for the max width allowed for options.
@@ -162,6 +162,16 @@ def _format_action_invocation(self, action):
             args_string = self._format_args(action, default)
             return optstring + "=" + args_string
 
+    class FluxRawDescriptionHelpFormatter(
+        FluxHelpFormatter, argparse.RawDescriptionHelpFormatter
+    ):
+        pass
+
+    if raw_description:
+        return lambda prog: FluxRawDescriptionHelpFormatter(
+            prog, max_help_position=argwidth
+        )
+
     return lambda prog: FluxHelpFormatter(prog, max_help_position=argwidth)
 
 

src/cmd/Makefile.am

@@ -117,7 +117,8 @@ dist_fluxcmd_SCRIPTS = \
 	flux-watch.py \
 	flux-update.py \
 	flux-imp-exec-helper \
-	py-runner.py
+	py-runner.py \
+	flux-hostlist.py
 
 fluxcmd_PROGRAMS = \
 	flux-terminus \