Merge pull request #16 from fractal-analytics-platform/docs_link

Add docs_link to manifest

Author: jluethi

.copier-answers.yml

@@ -1,5 +1,5 @@
 # Do not edit - changes here will be overwritten by Copier
-_commit: v0.4.2
+_commit: v0.4.4
 _src_path: gh:fractal-analytics-platform/fractal-tasks-template
 author_email: [email protected]
 author_name: Joel Luethi

.github/workflows/build_and_test.yml

@@ -2,11 +2,14 @@ name: CI (build and test)
 
 on:
   push:
-    branches: ["main"]
+    branches:
+      - main
     tags:
       - "*"
   pull_request:
-    branches: ["main"]
+  workflow_dispatch:
+  release:
+    types: [published]
 
 
 jobs:

src/fractal_helper_tasks/__FRACTAL_MANIFEST__.json

@@ -41,7 +41,8 @@
         "type": "object",
         "title": "DropTDimension"
       },
-      "docs_info": "## drop_t_dimension\nDrops singleton t dimension.\n"
+      "docs_info": "## drop_t_dimension\nDrops singleton t dimension.\n",
+      "docs_link": "https://github.com/jluethi/fractal-helper-tasks"
     },
     {
       "name": "Convert 2D segmentation to 3D",
@@ -125,7 +126,8 @@
         "type": "object",
         "title": "Convert2dSegmentationTo3d"
       },
-      "docs_info": "## convert_2D_segmentation_to_3D\nConvert 2D segmentation to 3D segmentation.\n\nThis task loads the 2D segmentation, replicates it along the Z slice and\nstores it back into the 3D OME-Zarr image.\n\nThis is a temporary workaround task, as long as we store 2D data in\na separate OME-Zarr file from the 3D data. If the 2D & 3D OME-Zarr images\nhave different suffixes in their name, use `image_suffix_2D_to_remove` &\n`image_suffix_3D_to_add`. If their base names are different, this task\ndoes not support processing them at the moment.\n\nIt makes the assumption that the 3D OME-Zarrs are stored in the same place\nas the 2D OME-Zarrs (same based folder).\n"
+      "docs_info": "## convert_2D_segmentation_to_3D\nConvert 2D segmentation to 3D segmentation.\n\nThis task loads the 2D segmentation, replicates it along the Z slice and\nstores it back into the 3D OME-Zarr image.\n\nThis is a temporary workaround task, as long as we store 2D data in\na separate OME-Zarr file from the 3D data. If the 2D & 3D OME-Zarr images\nhave different suffixes in their name, use `image_suffix_2D_to_remove` &\n`image_suffix_3D_to_add`. If their base names are different, this task\ndoes not support processing them at the moment.\n\nIt makes the assumption that the 3D OME-Zarrs are stored in the same place\nas the 2D OME-Zarrs (same based folder).\n",
+      "docs_link": "https://github.com/jluethi/fractal-helper-tasks"
     }
   ],
   "has_args_schemas": true,

src/fractal_helper_tasks/dev/create_manifest.py

@@ -8,4 +8,8 @@
     """
     PACKAGE = "fractal_helper_tasks"
     AUTHORS = "Joel Luethi"
-    create_manifest(package=PACKAGE, authors=AUTHORS)
+    docs_link = "https://github.com/jluethi/fractal-helper-tasks"
+    if docs_link:
+        create_manifest(package=PACKAGE, authors=AUTHORS, docs_link=docs_link)
+    else:
+        create_manifest(package=PACKAGE, authors=AUTHORS)