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lines changed Original file line number Diff line number Diff line change @@ -126,25 +126,21 @@ def rechunk_zarr(
126126 axes_mapper = old_label .meta .axes_mapper ,
127127 chunk_sizes = chunk_sizes ,
128128 )
129- ngio . images . label .derive_label (
129+ new_label = new_ome_zarr_container .derive_label (
130130 name = label ,
131- store = f"{ rechunked_zarr_url } /labels/{ label } " ,
132131 ref_image = old_label ,
133132 chunks = new_chunksize ,
134133 overwrite = overwrite ,
135134 )
136- new_ome_zarr_container = ngio .open_ome_zarr_container (rechunked_zarr_url )
137- print (new_ome_zarr_container .list_labels ())
138- print (rechunked_zarr_url )
139135 if rebuild_pyramids :
140- new_label = new_ome_zarr_container .get_label (name = label )
141136 new_label .set_array (old_label .get_array (mode = "dask" ))
142137 new_label .consolidate ()
143138 else :
144139 label_pyramid_paths = old_label .meta .paths
145140 for path in label_pyramid_paths :
146- new_ome_zarr_container .get_label (name = label , path = path ).set_array (
147- old_label .get_array (path = path , mode = "dask" )
141+ old_label = ome_zarr_container .get_label (name = label , path = path )
142+ new_label .set_array (
143+ old_label .get_array (mode = "dask" )
148144 )
149145
150146 if overwrite_input :
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