Merge pull request #879 from fractal-analytics-platform/xfail-bia-test

tcompa · web-flow · commit ee900a7e80c5 · 2024-12-17T08:44:40.000+01:00
Skip `test_import_ome_zarr_image_BIA`
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,5 +1,10 @@
 **Note**: Numbers like (\#123) point to closed Pull Requests on the fractal-tasks-core repository.
 
+# Unreleased
+
+* Tests:
+    * Skip `test_import_ome_zarr_image_BIA` (\#879).
+
 # 1.3.4
 
 * Manifest creation:
diff --git a/tests/tasks/test_import_ome_zarr.py b/tests/tasks/test_import_ome_zarr.py
@@ -263,8 +263,8 @@ def test_import_ome_zarr_plate_no_ROI_tables(tmp_path, zenodo_zarr):
         )
 
 
-# @pytest.mark.skip
-def test_import_ome_zarr_image_BIA(tmp_path, monkeypatch):
+@pytest.mark.skip(reason="Flaky test, see issue #878")
+def test_import_ome_zarr_image_BIA(tmp_path):
     """
     This test imports one of the BIA OME-Zarr listed in
     https://www.ebi.ac.uk/biostudies/bioimages/studies/S-BIAD843.

Original file line number	Diff line number	Diff line change
`@@ -263,8 +263,8 @@ def test_import_ome_zarr_plate_no_ROI_tables(tmp_path, zenodo_zarr):`
`263`	`263`	`)`
`264`	`264`
`265`	`265`
`266`		`-# @pytest.mark.skip`
`267`		`-def test_import_ome_zarr_image_BIA(tmp_path, monkeypatch):`
	`266`	`+@pytest.mark.skip(reason="Flaky test, see issue #878")`
	`267`	`+def test_import_ome_zarr_image_BIA(tmp_path):`
`268`	`268`	`"""`
`269`	`269`	`This test imports one of the BIA OME-Zarr listed in`
`270`	`270`	`https://www.ebi.ac.uk/biostudies/bioimages/studies/S-BIAD843.`