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Clarify last paragraph of pkgdown site's homepage
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pkgdown/index.md

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@@ -134,8 +134,7 @@ UMAP:
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- Dimension reduction: `RunUMAP()`
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- KNN graph: `RunUMAP(umap.method = "umap-learn")`
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## Scoring
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## Performance assessment
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SeuratIntegrate incorporates 11 scoring metrics: 6 quantify the degree of batch
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mixing (*batch correction*), while 5 assess the preservation of biological
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The `AddScore` functions have an advantage over the `Score` functions. They
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allow to then scale the scores between zero and one and to standardize their
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direction (the closer to one, always the better), improving interpretability.
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Then, scores can be plotted to readily compare the different integrations:
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direction (the closer to one, always the better), facilitating their readability.
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Scores can eventually be plotted to readily compare the different integrations:
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```R
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# scale

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