Skip to content

Commit 8c9119d

Browse files
authored
Update action.yaml
1 parent d454a3f commit 8c9119d

File tree

1 file changed

+1
-6
lines changed

1 file changed

+1
-6
lines changed

.github/actions/setup-conda/action.yaml

Lines changed: 1 addition & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -19,12 +19,7 @@ runs:
1919
pip install bbknn
2020
conda deactivate
2121
conda create -n SeuratIntegrate_scanorama python scanorama scipy -c conda-forge -c bioconda -y
22-
conda create -n SeuratIntegrate_scvi-tools python=3.12 pip -c conda-forge
23-
conda activate SeuratIntegrate_scvi-tools
24-
pip install jax
25-
pip install torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cpu
26-
pip install scvi-tools scanpy
27-
conda deactivate
22+
conda create -n SeuratIntegrate_scvi-tools python pip scvi-tools -c conda-forge
2823
shell: bash -l {0}
2924
working-directory: ${{ inputs.working-directory }}
3025

0 commit comments

Comments
 (0)