GA: modernizing

Author: HenrikBengtsson

.github/workflows/R-CMD-check.yaml

@@ -4,32 +4,35 @@ name: R-CMD-check
 
 jobs:
   R-CMD-check:
+    if: "! contains(github.event.head_commit.message, '[ci skip]')"    
+
     runs-on: ${{ matrix.config.os }}
+
     name: ${{ matrix.config.os }} (${{ matrix.config.r }})
-    if: "! contains(github.event.head_commit.message, '[ci skip]')"
-    
+
     strategy:
       fail-fast: false
       matrix:
         config:
-        - { os: windows-latest, r: '3.5'}
-        - { os: windows-latest, r: '3.6'}
-        - { os: macOS-latest, r: '3.5'}
-        - { os: macOS-latest, r: '3.6'}
-        - { os: macOS-latest, r: 'devel'}
-        - { os: ubuntu-16.04, r: '3.2', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
-        - { os: ubuntu-16.04, r: '3.3', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
-        - { os: ubuntu-16.04, r: '3.4', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
-        - { os: ubuntu-16.04, r: '3.5', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
-        - { os: ubuntu-16.04, r: '3.6', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
+          - {os: windows-latest, r: 'devel'}
+#2020-09-23#          - {os: windows-latest, r: 'release'}
+          - {os: macOS-latest,   r: 'devel'}
+          - {os: macOS-latest,   r: 'release'}
+          - {os: ubuntu-20.04,   r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-20.04,   r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-20.04,   r: 'oldrel',  rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-20.04,   r: '3.5',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-20.04,   r: '3.4',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-20.04,   r: '3.3',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
 
     env:
       R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
-      CRAN: ${{ matrix.config.cran }}
-
+      R_FUTURE_RNG_ONMISUSE: error
+      RSPM: ${{ matrix.config.rspm }}
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
 
     steps:
-      - uses: actions/checkout@v1
+      - uses: actions/checkout@v2
 
       - uses: r-lib/actions/setup-r@master
         with:
@@ -38,15 +41,19 @@ jobs:
       - uses: r-lib/actions/setup-pandoc@master
 
       - name: Query dependencies
-        run: Rscript -e "install.packages('remotes')" -e "saveRDS(remotes::dev_package_deps(dependencies = TRUE), 'depends.Rds', version = 2)"
+        run: |
+          install.packages('remotes')
+          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
+          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
+        shell: Rscript {0}
 
       - name: Cache R packages
         if: runner.os != 'Windows'
         uses: actions/cache@v1
         with:
           path: ${{ env.R_LIBS_USER }}
-          key: ${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('depends.Rds') }}
-          restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-
+          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
+          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
 
       - name: Install system dependencies
         if: runner.os == 'Linux'
@@ -59,20 +66,27 @@ jobs:
 
       - name: Install dependencies
         run: |
-          Rscript -e "library(remotes)" -e "update(readRDS('depends.Rds'))" -e "remotes::install_cran('rcmdcheck')"
-          Rscript -e "install.packages('.', type = 'source', repos = NULL)"
+          remotes::install_deps(dependencies = TRUE)
+          remotes::install_cran("rcmdcheck")
+          install.packages(".", repos=NULL, type="source")  ## needed by parallel workers
+        shell: Rscript {0}
+
+      - name: Session info
+        run: |
+          options(width = 100)
+          pkgs <- installed.packages()[, "Package"]
+          sessioninfo::session_info(pkgs, include_base = TRUE)
+        shell: Rscript {0}
 
       - name: Check
-        run: Rscript -e "rcmdcheck::rcmdcheck(args = '--no-manual', error_on = 'warning', check_dir = 'check')"
+        env:
+          _R_CHECK_CRAN_INCOMING_REMOTE_: false
+        run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
+        shell: Rscript {0}
 
       - name: Upload check results
         if: failure()
         uses: actions/upload-artifact@master
         with:
           name: ${{ runner.os }}-r${{ matrix.config.r }}-results
           path: check
-
-      - name: Test coverage
-        if: matrix.config.os == 'ubuntu-16.04' && matrix.config.r == '3.6-HIDE'
-        run: |
-          Rscript  -e "install.packages('covr')" -e 'covr::codecov(token = "${{secrets.CODECOV_TOKEN}}")'

.gitignore

@@ -20,3 +20,4 @@
 revdep/data.sqlite
 revdep/checks/*
 revdep/library/*
+.github/

NEWS

@@ -1,9 +1,11 @@
 Package: future.batchtools
 ==========================
 
-Version: 0.9.0-9000 [2020-04-14]
+Version: 0.9.0-9000 [2020-09-30]
 
- * ...
+DOCUMENTATION:
+
+ * Documenting option 'future.debug' in help("future.batchtools.options").
 
 
 Version: 0.9.0 [2020-04-14]