|
10 | 10 | |collate |en_US.UTF-8 | |
11 | 11 | |ctype |en_US.UTF-8 | |
12 | 12 | |tz |America/Los_Angeles | |
13 | | -|date |2025-11-05 | |
| 13 | +|date |2025-11-16 | |
14 | 14 | |pandoc |3.8.2.1 @ /software/c4/cbi/software/pandoc-3.8.2.1/bin/pandoc | |
15 | 15 | |quarto |1.8.25 @ /software/c4/cbi/software/quarto-1.8.25/bin/quarto | |
16 | 16 |
|
|
20 | 20 | |:----------|:------|:-----------|:--| |
21 | 21 | |future |1.67.0 |1.67.0-9019 |* | |
22 | 22 | |codetools |0.2-20 |0.2-20 | | |
23 | | -|digest |0.6.37 |0.6.37 | | |
| 23 | +|digest |0.6.37 |0.6.38 |* | |
24 | 24 | |globals |0.18.0 |0.18.0 | | |
25 | | -|listenv |0.10.0 |0.10.0 | | |
26 | | -|parallelly |1.45.1 |1.45.1 | | |
| 25 | +|listenv |0.9.1 |0.10.0 |* | |
| 26 | +|parallelly |1.45.0 |1.45.1 |* | |
27 | 27 |
|
28 | 28 | # Revdeps |
29 | 29 |
|
30 | | -## Failed to check (2) |
| 30 | +## Failed to check (3) |
31 | 31 |
|
32 | 32 | |package |version |error |warning |note | |
33 | 33 | |:----------------|:-------|:-----|:-------|:----| |
| 34 | +|[InPAS](failures.md#inpas)|2.18.0 |1 | | | |
34 | 35 | |[TriDimRegression](failures.md#tridimregression)|1.0.3 |1 | | | |
35 | 36 | |[XNAString](failures.md#xnastring)|1.15.0 |1 | | | |
36 | 37 |
|
37 | | -## All (494) |
| 38 | +## All (501) |
38 | 39 |
|
39 | 40 | |package |version |error |warning |note | |
40 | 41 | |:----------------------------|:---------|:-----|:-------|:----| |
|
59 | 60 | |BAMBI |2.3.6 | | | | |
60 | 61 | |[bamm](problems.md#bamm) |0.5.0 | | |1 | |
61 | 62 | |[baseballr](problems.md#baseballr)|1.6.0 | | |1 | |
62 | | -|[BatchGetSymbols](problems.md#batchgetsymbols)|2.6.4 | | |1 | |
| 63 | +|BatchGetSymbols |2.6.4 | | | | |
63 | 64 | |batchtools |0.9.18 | | | | |
64 | 65 | |bayesian |1.0.1 | | | | |
65 | 66 | |BayesianMCPMod |1.2.0 | | | | |
|
80 | 81 | |bsitar |0.3.2 | | | | |
81 | 82 | |bslib |0.9.0 | | | | |
82 | 83 | |bspcov |1.0.3 | | | | |
83 | | -|CAESAR.Suite |0.2.2 | | | | |
| 84 | +|CAESAR.Suite |0.2.3 | | | | |
84 | 85 | |calmr |0.8.1 | | | | |
85 | 86 | |campsis |1.7.0 | | | | |
86 | 87 | |canaper |1.0.1 | | | | |
87 | | -|caretSDM |1.1.4 | | | | |
| 88 | +|caretSDM |1.2.3 | | | | |
| 89 | +|carts |0.1.0 | | | | |
88 | 90 | |cccrm |3.0.5 | | | | |
89 | 91 | |cellGeometry |0.5.4 | | | | |
90 | 92 | |[ceRNAnetsim](problems.md#cernanetsim)|1.22.0 | | |1 | |
|
158 | 160 | |fabletools |0.5.1 | | | | |
159 | 161 | |FAMoS |0.3.1 | | | | |
160 | 162 | |fastbioclim |0.2.1 | | | | |
161 | | -|FastJM |1.5.2 | | | | |
| 163 | +|FastJM |1.5.3 | | | | |
162 | 164 | |fastml |0.7.0 | | | | |
163 | 165 | |FastRet |1.1.4 | | | | |
164 | 166 | |[fastRhockey](problems.md#fastrhockey)|0.4.0 | | |1 | |
165 | 167 | |[fdacluster](problems.md#fdacluster)|0.4.1 | |1 |1 | |
166 | 168 | |FDOTT |0.1.0 | | | | |
167 | 169 | |fdWasserstein |1.0 | | | | |
168 | 170 | |fect |2.0.5 | | | | |
169 | | -|fEGarch |1.0.2 | | | | |
| 171 | +|fEGarch |1.0.3 | | | | |
170 | 172 | |[ferrn](problems.md#ferrn) |0.1.0 | | |1 | |
171 | | -|[fiery](problems.md#fiery) |1.3.0 | | |1 | |
| 173 | +|fiery |1.4.0 | | | | |
172 | 174 | |finbif |0.9.11 | | | | |
173 | 175 | |fitlandr |0.1.0 | | | | |
174 | 176 | |flexFitR |1.2.1 | | | | |
175 | 177 | |[flowGraph](problems.md#flowgraph)|1.18.0 | | |2 | |
176 | 178 | |flowml |0.1.3 | | | | |
177 | | -|[fmeffects](problems.md#fmeffects)|0.1.4 |1 | | | |
| 179 | +|fmeffects |0.1.4 | | | | |
178 | 180 | |[forecastML](problems.md#forecastml)|0.9.0 | | |1 | |
179 | 181 | |[FracFixR](problems.md#fracfixr)|1.0.0 |1 | | | |
180 | 182 | |fst4pg |1.0.0 | | | | |
|
197 | 199 | |geomeTriD |1.4.0 | | | | |
198 | 200 | |GeoModels |2.2.0 | | | | |
199 | 201 | |GetBCBData |0.9.0 | | | | |
200 | | -|glyrepr |0.7.5 | | | | |
| 202 | +|glyrepr |0.8.0 | | | | |
201 | 203 | |[googleComputeEngineR](problems.md#googlecomputeenginer)|0.3.0 | | |1 | |
202 | 204 | |googlePubsubR |0.0.4 | | | | |
203 | 205 | |[googleTagManageR](problems.md#googletagmanager)|0.2.0 | | |1 | |
|
206 | 208 | |[greenSD](problems.md#greensd)|0.1.1 |1 | | | |
207 | 209 | |[greta](problems.md#greta) |0.5.0 |1 | | | |
208 | 210 | |gstat |2.1-4 | | | | |
209 | | -|GSVA |2.4.0 | | | | |
| 211 | +|GSVA |2.4.1 | | | | |
210 | 212 | |[gsynth](problems.md#gsynth) |1.2.1 | | |1 | |
211 | 213 | |gtfs2emis |0.1.1 | | | | |
212 | 214 | |gtfs2gps |2.1-3 | | | | |
|
230 | 232 | |[infercnv](problems.md#infercnv)|1.26.0 | | |2 | |
231 | 233 | |inlinedocs |2023.9.4 | | | | |
232 | 234 | |ino |1.2.0 | | | | |
233 | | -|[InPAS](problems.md#inpas) |2.18.0 | |1 |2 | |
| 235 | +|[InPAS](failures.md#inpas) |2.18.0 |1 | | | |
234 | 236 | |[interflex](problems.md#interflex)|1.2.6 | | |1 | |
235 | 237 | |InterpolateR |1.4-3 | | | | |
236 | 238 | |ipc |0.1.4 | | | | |
|
243 | 245 | |JANE |2.1.0 | | | | |
244 | 246 | |jlmerclusterperm |1.1.4 | | | | |
245 | 247 | |[JointAI](problems.md#jointai)|1.0.6 | | |1 | |
246 | | -|jpinfect |0.1.5 | | | | |
| 248 | +|jpinfect |0.1.6 | | | | |
247 | 249 | |jstor |0.3.11 | | | | |
248 | 250 | |JuliaConnectoR |1.1.4 | | | | |
249 | 251 | |[kappaGold](problems.md#kappagold)|0.4.0 | | |1 | |
|
261 | 263 | |lemna |1.0.2 | | | | |
262 | 264 | |LexFindR |1.1.0 | | | | |
263 | 265 | |lgr |0.5.0 | | | | |
264 | | -|[lidR](problems.md#lidr) |4.2.1 |1 | | | |
| 266 | +|[lidR](problems.md#lidr) |4.2.2 |1 | | | |
265 | 267 | |lightr |1.9.0 | | | | |
266 | 268 | |LipidMS |3.1.1 | | | | |
267 | 269 | |LLMR |0.6.3 | | | | |
|
274 | 276 | |malariaAtlas |1.6.4 | | | | |
275 | 277 | |MAMS |3.0.3 | | | | |
276 | 278 | |[mapme.biodiversity](problems.md#mapmebiodiversity)|0.9.5 |1 | | | |
277 | | -|marginaleffects |0.30.0 | | | | |
278 | | -|mbbe |0.1.0 | | | | |
| 279 | +|marginaleffects |0.31.0 | | | | |
| 280 | +|[mbbe](problems.md#mbbe) |0.1.0 |1 | | | |
279 | 281 | |mcmcensemble |3.2.0 | | | | |
280 | 282 | |mcp |0.3.4 | | | | |
281 | 283 | |MDCcure |0.1.0 | | | | |
|
288 | 290 | |[mikropml](problems.md#mikropml)|1.7.0 | | |1 | |
289 | 291 | |[MineICA](problems.md#mineica)|1.49.0 |1 |4 |3 | |
290 | 292 | |missSBM |1.0.5 | | | | |
291 | | -|[mistyR](problems.md#mistyr) |1.18.0 |-1 | |2 | |
| 293 | +|[mistyR](problems.md#mistyr) |1.18.0 | | |2 | |
292 | 294 | |mlr3 |1.2.0 | | | | |
293 | 295 | |mlr3db |0.7.0 | | | | |
294 | 296 | |mlr3fairness |0.4.0 | | | | |
295 | 297 | |mlr3inferr |0.2.0 | | | | |
296 | 298 | |mlr3learners |0.13.0 | | | | |
297 | | -|mlr3pipelines |0.9.0 | | | | |
| 299 | +|mlr3pipelines |0.10.0 | | | | |
298 | 300 | |mlr3resampling |2025.6.23 | | | | |
299 | 301 | |mlr3spatial |0.6.1 | | | | |
300 | 302 | |mlr3summary |0.1.0 | | | | |
301 | 303 | |mlr3torch |0.3.2 | | | | |
302 | | -|mlr3tuning |1.4.0 | | | | |
| 304 | +|mlr3tuning |1.5.0 | | | | |
303 | 305 | |modelsummary |2.5.0 | | | | |
304 | 306 | |modeltime |1.3.2 | | | | |
305 | 307 | |modeltuning |0.1.2 | | | | |
|
308 | 310 | |mrgsim.parallel |0.3.0 | | | | |
309 | 311 | |mrIML |2.1.0 | | | | |
310 | 312 | |mslp |1.12.0 | | | | |
311 | | -|multilevelcoda |1.3.2 | | | | |
| 313 | +|multilevelcoda |1.3.3 | | | | |
312 | 314 | |multilevelmediation |0.4.1 | | | | |
313 | 315 | |multitool |0.1.5 | | | | |
314 | 316 | |[multiverse](problems.md#multiverse)|0.6.2 | | |1 | |
|
322 | 324 | |nfl4th |1.0.4 | | | | |
323 | 325 | |nflfastR |5.1.0 | | | | |
324 | 326 | |nflseedR |2.0.1 | | | | |
325 | | -|nhdplusTools |1.3.2 | | | | |
| 327 | +|[nhdplusTools](problems.md#nhdplustools)|1.3.2 |1 | | | |
326 | 328 | |[nixtlar](problems.md#nixtlar)|0.6.2 | | |1 | |
327 | 329 | |nncc |2.0.0 | | | | |
328 | 330 | |normref |0.0.0.1 | | | | |
329 | 331 | |oeli |0.7.5 | | | | |
330 | 332 | |oncomsm |0.1.4 | | | | |
331 | 333 | |onemapsgapi |2.0.0 | | | | |
332 | 334 | |OOS |1.0.0 | | | | |
| 335 | +|opImputation |0.6 | | | | |
333 | 336 | |optic |1.0.1 | | | | |
334 | 337 | |optimLanduse |1.2.1 | | | | |
335 | 338 | |origami |1.0.7 | | | | |
|
346 | 349 | |[pavo](problems.md#pavo) |2.9.0 | |1 | | |
347 | 350 | |pbapply |1.7-4 | | | | |
348 | 351 | |pcpr |1.0.0 | | | | |
349 | | -|PCRedux |1.2-0 | | | | |
| 352 | +|[PCRedux](problems.md#pcredux)|1.2-0 |1 | | | |
350 | 353 | |PeakSegDisk |2024.10.1 | | | | |
351 | 354 | |penaltyLearning |2024.9.3 | | | | |
352 | 355 | |pGRN |0.3.5 | | | | |
353 | | -|[pgxRpi](problems.md#pgxrpi) |1.6.0 | | |1 | |
| 356 | +|[pgxRpi](problems.md#pgxrpi) |1.6.0 |1 | |1 | |
354 | 357 | |[photosynthesis](problems.md#photosynthesis)|2.1.5 | | |1 | |
355 | 358 | |phylolm |2.6.5 | | | | |
356 | 359 | |phylopath |1.3.1 | | | | |
357 | 360 | |phylospatial |1.1.1 | | | | |
| 361 | +|phyr |1.1.3 | | | | |
358 | 362 | |PINstimation |0.1.2 | | | | |
359 | 363 | |PLNmodels |1.2.2 | | | | |
360 | 364 | |plumber |1.3.0 | | | | |
|
366 | 370 | |powergrid |0.5.0 | | | | |
367 | 371 | |[powRICLPM](problems.md#powriclpm)|0.2.1 | | |1 | |
368 | 372 | |ProFAST |1.6 | | | | |
369 | | -|progressr |0.17.0 | | | | |
| 373 | +|progressr |0.18.0 | | | | |
370 | 374 | |projpred |2.9.1 | | | | |
371 | 375 | |promises |1.5.0 | | | | |
372 | 376 | |[Prostar](problems.md#prostar)|1.42.0 | |1 |3 | |
|
392 | 396 | |[receptiviti](problems.md#receptiviti)|0.2.0 |1 | | | |
393 | 397 | |recforest |1.0.0 | | | | |
394 | 398 | |rechaRge |1.0.0 | | | | |
395 | | -|refineR |1.6.2 | | | | |
396 | | -|[regmedint](problems.md#regmedint)|1.0.1 | | |1 | |
| 399 | +|refineR |2.0.0 | | | | |
| 400 | +|[regmedint](problems.md#regmedint)|1.0.1 |1 | |1 | |
397 | 401 | |remiod |1.0.2 | | | | |
398 | 402 | |reproducible |2.1.2 | | | | |
399 | 403 | |restriktor |0.6-10 | | | | |
400 | 404 | |reval |3.1-0 | | | | |
401 | 405 | |rgee |1.1.8 | | | | |
402 | 406 | |rgeomorphon |0.3.0 | | | | |
| 407 | +|riemtan |0.2.5 | | | | |
403 | 408 | |robotstxt |0.7.15 | | | | |
404 | 409 | |robust2sls |0.2.3 | | | | |
405 | 410 | |rosario |0.1.0 | | | | |
406 | 411 | |rpm |0.7-4 | | | | |
407 | | -|rSDR |1.0.2.1 | | | | |
| 412 | +|rSDR |1.0.3.0 | | | | |
408 | 413 | |[rsi](problems.md#rsi) |0.3.2 | | |1 | |
409 | 414 | |Rsolnp |2.0.1 | | | | |
410 | 415 | |RTransferEntropy |0.2.21 | | | | |
|
417 | 422 | |scDiffCom |1.2.0 | | | | |
418 | 423 | |SCGLR |3.1.0 | | | | |
419 | 424 | |scLANE |1.0.0 | | | | |
| 425 | +|scRNAseqApp |1.10.0 | | | | |
420 | 426 | |scStability |1.0.3 | | | | |
421 | 427 | |SCtools |0.3.3.1 | | | | |
422 | 428 | |sctransform |0.4.2 | | | | |
|
425 | 431 | |seer |1.1.8 | | | | |
426 | 432 | |segen |2.0.0 | | | | |
427 | 433 | |segtest |2.0.0 | | | | |
| 434 | +|SelectBoost.beta |0.4.5 | | | | |
428 | 435 | |semPower |2.1.3 | | | | |
429 | 436 | |semtree |0.9.22 | | | | |
430 | 437 | |sentopics |0.7.6 | | | | |
431 | 438 | |seqHMM |2.1.0 | | | | |
432 | | -|SEQTaRget |1.1.1 | | | | |
| 439 | +|SEQTaRget |1.3.2 | | | | |
433 | 440 | |Seurat |5.3.1 | | | | |
434 | 441 | |SeuratObject |5.2.0 | | | | |
435 | 442 | |SFHNV |0.1.0 | | | | |
436 | 443 | |shapr |1.0.5 | | | | |
437 | 444 | |sharp |1.4.8 | | | | |
438 | 445 | |shiny |1.11.1 | | | | |
439 | 446 | |shinyCLT |0.9.4 | | | | |
| 447 | +|[shinyOAuth](problems.md#shinyoauth)|0.1.3 |1 | | | |
440 | 448 | |[sigminer](problems.md#sigminer)|2.3.1 | | |1 | |
441 | 449 | |Signac |1.16.0 | | | | |
442 | 450 | |[signeR](problems.md#signer) |2.12.0 | | |3 | |
|
466 | 474 | |specr |1.0.0 | | | | |
467 | 475 | |[sperrorest](problems.md#sperrorest)|3.0.5 | | |1 | |
468 | 476 | |spFSR |2.0.4 | | | | |
469 | | -|sphunif |1.4.2 | | | | |
| 477 | +|sphunif |1.4.3 | | | | |
470 | 478 | |spinebil |1.0.5 | | | | |
471 | 479 | |spNetwork |0.4.4.7 | | | | |
472 | 480 | |spStack |1.1.2 | | | | |
|
510 | 518 | |[tsmarch](problems.md#tsmarch)|1.0.0 |1 | | | |
511 | 519 | |tune |2.0.1 | | | | |
512 | 520 | |[txshift](problems.md#txshift)|0.3.8 | | |1 | |
513 | | -|uci |0.3.0 | | | | |
| 521 | +|uci |0.3.1 | | | | |
514 | 522 | |UCSCXenaShiny |2.2.0 | | | | |
515 | 523 | |updog |2.1.6 | | | | |
516 | 524 | |vecmatch |1.2.0 | | | | |
|
524 | 532 | |wildmeta |0.3.2 | | | | |
525 | 533 | |wingen |2.2.0 | | | | |
526 | 534 | |winputall |1.0.1 | | | | |
527 | | -|wizaRdry |0.2.6 | | | | |
| 535 | +|wizaRdry |0.5.0 | | | | |
528 | 536 | |wqspt |1.0.2 | | | | |
529 | 537 | |[wru](problems.md#wru) |3.0.3 | | |1 | |
530 | 538 | |xegaPopulation |1.0.0.10 | | | | |
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