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Updated 'gh-pages' from docs/ folder
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pkgdown.yml

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@@ -11,7 +11,7 @@ articles:
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parallelly-21-container-workers: parallelly-21-container-workers.html
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parallelly-22-wine-workers: parallelly-22-wine-workers.html
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parallelly-25-sandbox-workers: parallelly-25-sandbox-workers.html
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last_built: 2026-03-04T05:55Z
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last_built: 2026-03-04T05:57Z
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urls:
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reference: https://parallelly.futureverse.org/reference
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article: https://parallelly.futureverse.org/articles

reference/as.cluster.html

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reference/as.cluster.md

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@@ -56,39 +56,39 @@ cl1 <- makeClusterPSOCK(2, dryrun = TRUE)
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#> ----------------------------------------------------------------------
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#> Manually, start worker #1 on local machine ‘localhost’ with:
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#>
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#> '/home/hb/shared/software/CBI/_ubuntu24_04/R-4.5.2-gcc13/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions="no-delay")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11793 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
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#> '/home/hb/shared/software/CBI/_ubuntu24_04/R-4.5.2-gcc13/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions="no-delay")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11318 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
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#>
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#> ----------------------------------------------------------------------
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#> Manually, start worker #2 on local machine ‘localhost’ with:
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#>
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#> '/home/hb/shared/software/CBI/_ubuntu24_04/R-4.5.2-gcc13/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions="no-delay")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11793 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
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#> '/home/hb/shared/software/CBI/_ubuntu24_04/R-4.5.2-gcc13/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions="no-delay")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11318 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
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#>
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cl2 <- makeClusterPSOCK(c("n1", "server.remote.org"), dryrun = TRUE)
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#> ----------------------------------------------------------------------
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#> Manually, (i) login into external machine ‘n1’:
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#>
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#> '/usr/bin/ssh' -R 11381:localhost:11381 n1
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#> '/usr/bin/ssh' -R 11730:localhost:11730 n1
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#>
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#> and (ii) start worker #1 from there:
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#>
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#> '/home/hb/shared/software/CBI/_ubuntu24_04/R-4.5.2-gcc13/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions="no-delay")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11381 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
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#> '/home/hb/shared/software/CBI/_ubuntu24_04/R-4.5.2-gcc13/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions="no-delay")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11730 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
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#>
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#> Alternatively, start worker #1 from the local machine by combining both steps in a single call:
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#> '/usr/bin/ssh' -R 11381:localhost:11381 n1 "'/home/hb/shared/software/CBI/_ubuntu24_04/R-4.5.2-gcc13/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions=\"no-delay\")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11381 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential"
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#> '/usr/bin/ssh' -R 11730:localhost:11730 n1 "'/home/hb/shared/software/CBI/_ubuntu24_04/R-4.5.2-gcc13/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions=\"no-delay\")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11730 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential"
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#>
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#> ----------------------------------------------------------------------
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#> Manually, (i) login into external machine ‘server.remote.org’:
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#>
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#> '/usr/bin/ssh' -R 11382:localhost:11381 server.remote.org
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#> '/usr/bin/ssh' -R 11731:localhost:11730 server.remote.org
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#>
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#> and (ii) start worker #2 from there:
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#> 'Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions="no-delay")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11382 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
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#> 'Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions="no-delay")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11731 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
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#>
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#> Alternatively, start worker #2 from the local machine by combining both steps in a single call:
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#> '/usr/bin/ssh' -R 11382:localhost:11381 server.remote.org "'Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions=\"no-delay\")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11382 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential"
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#> '/usr/bin/ssh' -R 11731:localhost:11730 server.remote.org "'Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions=\"no-delay\")' -e 'workRSOCK<-tryCatch(parallel:::.workRSOCK,error=function(e)parallel:::.slaveRSOCK);workRSOCK()' MASTER=localhost PORT=11731 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential"
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#>
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cl <- c(cl1, cl2)
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#> Warning: The combined cluster contains 3 duplicated nodes

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