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Merge pull request #2 from fvalle1/develop
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‎.dockerignore‎

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# Byte-compiled / optimized / DLL files
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__pycache__/
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*.py[cod]
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*$py.class
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# C extensions
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*.so
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# Distribution / packaging
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.Python
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build/
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develop-eggs/
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dist/
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downloads/
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eggs/
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.eggs/
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lib/
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lib64/
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parts/
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sdist/
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var/
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wheels/
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pip-wheel-metadata/
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share/python-wheels/
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*.egg-info/
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.installed.cfg
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*.egg
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MANIFEST
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# PyInstaller
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# Usually these files are written by a python script from a template
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# before PyInstaller builds the exe, so as to inject date/other infos into it.
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*.manifest
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*.spec
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# Installer logs
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pip-log.txt
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pip-delete-this-directory.txt
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# Unit test / coverage reports
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htmlcov/
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.tox/
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.nox/
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.coverage
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.coverage.*
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.cache
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nosetests.xml
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coverage.xml
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*.cover
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*.py,cover
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.hypothesis/
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.pytest_cache/
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# Translations
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*.mo
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*.pot
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# Django stuff:
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*.log
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local_settings.py
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db.sqlite3
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db.sqlite3-journal
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# Flask stuff:
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instance/
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.webassets-cache
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# Scrapy stuff:
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.scrapy
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# Sphinx documentation
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docs/_build/
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# PyBuilder
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target/
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# Jupyter Notebook
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.ipynb_checkpoints
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# IPython
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profile_default/
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ipython_config.py
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# pyenv
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.python-version
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# pipenv
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# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
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# However, in case of collaboration, if having platform-specific dependencies or dependencies
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# having no cross-platform support, pipenv may install dependencies that don't work, or not
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# install all needed dependencies.
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#Pipfile.lock
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# PEP 582; used by e.g. github.com/David-OConnor/pyflow
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__pypackages__/
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# Celery stuff
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celerybeat-schedule
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celerybeat.pid
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# SageMath parsed files
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*.sage.py
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# Environments
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.env
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.venv
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env/
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venv/
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ENV/
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env.bak/
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venv.bak/
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# Spyder project settings
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.spyderproject
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.spyproject
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# Rope project settings
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.ropeproject
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# mkdocs documentation
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/site
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# mypy
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.mypy_cache/
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.dmypy.json
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dmypy.json
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# Pyre type checker
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.pyre/
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*.pdf
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*.png
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*.scores
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*.DS_Store
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*.csv
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*.tsv
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*.pkl
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*.h5
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*.ipynb
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breast/
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lung/
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unified_lung

‎.dvc/.gitignore‎

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/config.local
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/tmp
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/cache

‎.dvc/config‎

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['remote "mydrive"']
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url = gdrive://1_0N58fnYu8CrnEgNIj4jKWLUOlcz5Emx

‎.dvc/plots/confusion.json‎

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{
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"$schema": "https://vega.github.io/schema/vega-lite/v4.json",
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"data": {
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"values": "<DVC_METRIC_DATA>"
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},
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"title": "<DVC_METRIC_TITLE>",
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"mark": "rect",
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"encoding": {
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"x": {
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"field": "<DVC_METRIC_X>",
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"type": "nominal",
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"sort": "ascending",
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"title": "<DVC_METRIC_X_LABEL>"
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},
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"y": {
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"field": "<DVC_METRIC_Y>",
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"type": "nominal",
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"sort": "ascending",
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"title": "<DVC_METRIC_Y_LABEL>"
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},
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"color": {
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"aggregate": "count",
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"type": "quantitative"
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},
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"facet": {
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"field": "rev",
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"type": "nominal"
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}
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}
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}

‎.dvc/plots/default.json‎

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{
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"$schema": "https://vega.github.io/schema/vega-lite/v4.json",
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"data": {
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"values": "<DVC_METRIC_DATA>"
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},
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"title": "<DVC_METRIC_TITLE>",
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"mark": {
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"type": "line"
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},
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"encoding": {
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"x": {
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"field": "<DVC_METRIC_X>",
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"type": "quantitative",
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"title": "<DVC_METRIC_X_LABEL>"
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},
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"y": {
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"field": "<DVC_METRIC_Y>",
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"type": "quantitative",
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"title": "<DVC_METRIC_Y_LABEL>",
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"scale": {
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"zero": false
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}
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},
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"color": {
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"field": "rev",
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"type": "nominal"
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}
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}
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}

‎.dvc/plots/scatter.json‎

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{
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"$schema": "https://vega.github.io/schema/vega-lite/v4.json",
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"data": {
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"values": "<DVC_METRIC_DATA>"
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},
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"title": "<DVC_METRIC_TITLE>",
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"mark": "point",
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"encoding": {
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"x": {
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"field": "<DVC_METRIC_X>",
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"type": "quantitative",
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"title": "<DVC_METRIC_X_LABEL>"
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},
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"y": {
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"field": "<DVC_METRIC_Y>",
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"type": "quantitative",
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"title": "<DVC_METRIC_Y_LABEL>",
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"scale": {
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"zero": false
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}
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},
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"color": {
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"field": "rev",
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"type": "nominal"
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}
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}
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}

‎.dvc/plots/smooth.json‎

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{
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"$schema": "https://vega.github.io/schema/vega-lite/v4.json",
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"data": {
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"values": "<DVC_METRIC_DATA>"
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},
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"title": "<DVC_METRIC_TITLE>",
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"mark": {
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"type": "line"
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},
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"encoding": {
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"x": {
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"field": "<DVC_METRIC_X>",
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"type": "quantitative",
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"title": "<DVC_METRIC_X_LABEL>"
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},
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"y": {
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"field": "<DVC_METRIC_Y>",
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"type": "quantitative",
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"title": "<DVC_METRIC_Y_LABEL>",
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"scale": {
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"zero": false
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}
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},
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"color": {
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"field": "rev",
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"type": "nominal"
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}
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},
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"transform": [
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{
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"loess": "<DVC_METRIC_Y>",
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"on": "<DVC_METRIC_X>",
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"groupby": [
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"rev"
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],
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"bandwidth": 0.3
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}
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]
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}

‎.dvcignore‎

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# Add patterns of files dvc should ignore, which could improve
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# the performance. Learn more at
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# https://dvc.org/doc/user-guide/dvcignore

‎.gitignore‎

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# Pyre type checker
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.pyre/
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*.pdf
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*.png
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*.scores
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*.DS_Store
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*.done
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*.err
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*.tsv
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*.pdf
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unified_lung/data/
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*.csv
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*.dat

‎.gitmodules‎

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[submodule "tree_plotter"]
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path = tree_plotter
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url = [email protected]:fvalle1/tree_plotter

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