Fix feature intervals call

guerler · guerler · commit 4a1d9a73462f · 2025-10-07T07:33:38.000+03:00
diff --git a/lib/galaxy/visualization/data_providers/genome.py b/lib/galaxy/visualization/data_providers/genome.py
@@ -1630,8 +1630,8 @@ def package_gff_feature(feature, no_detail=False, filter_cols=None) -> PAYLOAD_L
     ]
 
     # Add blocks.
-    block_sizes = [(interval.end - interval.start) for interval in feature_intervals]
-    block_starts = [(interval.start - feature.start) for interval in feature_intervals]
+    block_sizes = [(interval.end - interval.start) for interval in feature.intervals]
+    block_starts = [(interval.start - feature.start) for interval in feature.intervals]
     blocks = list(zip(block_sizes, block_starts))
     payload.append([(feature.start + block[1], feature.start + block[1] + block[0]) for block in blocks])
 

Original file line number	Diff line number	Diff line change
`@@ -1630,8 +1630,8 @@ def package_gff_feature(feature, no_detail=False, filter_cols=None) -> PAYLOAD_L`
`1630`	`1630`	`]`
`1631`	`1631`
`1632`	`1632`	`# Add blocks.`
`1633`		`- block_sizes = [(interval.end - interval.start) for interval in feature_intervals]`
`1634`		`- block_starts = [(interval.start - feature.start) for interval in feature_intervals]`
	`1633`	`+ block_sizes = [(interval.end - interval.start) for interval in feature.intervals]`
	`1634`	`+ block_starts = [(interval.start - feature.start) for interval in feature.intervals]`
`1635`	`1635`	`blocks = list(zip(block_sizes, block_starts))`
`1636`	`1636`	`payload.append([(feature.start + block[1], feature.start + block[1] + block[0]) for block in blocks])`
`1637`	`1637`