Merge pull request #661 from planemo-autoupdate/workflows/transcriptomics/rnaseq-de

Updating workflows/transcriptomics/rnaseq-de from 0.2 to 0.3

Author: bgruening

workflows/transcriptomics/rnaseq-de/CHANGELOG.md

@@ -1,5 +1,10 @@
 # Changelog
 
+## [0.3] 2025-02-03
+
+### Automatic update
+- `toolshed.g2.bx.psu.edu/repos/iuc/volcanoplot/volcanoplot/0.0.6` was updated to `toolshed.g2.bx.psu.edu/repos/iuc/volcanoplot/volcanoplot/0.0.7`
+
 ## [0.2] 2024-11-18
 
 ### Automatic update

workflows/transcriptomics/rnaseq-de/rnaseq-de-filtering-plotting.ga

@@ -11,7 +11,7 @@
     ],
     "format-version": "0.1",
     "license": "MIT",
-    "release": "0.2",
+    "release": "0.3",
     "name": "RNAseq_DE_filtering_plotting",
     "report": {
         "markdown": "\n# Workflow Execution Report\n\n## Workflow Inputs\n```galaxy\ninvocation_inputs()\n```\n\n## Workflow Outputs\n```galaxy\ninvocation_outputs()\n```\n\n## Workflow\n```galaxy\nworkflow_display()\n```\n"
@@ -778,7 +778,7 @@
         },
         "18": {
             "annotation": "",
-            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/volcanoplot/volcanoplot/0.0.6",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/volcanoplot/volcanoplot/0.0.7",
             "errors": null,
             "id": 18,
             "input_connections": {
@@ -809,15 +809,15 @@
                 "top": 957.2308087191843
             },
             "post_job_actions": {},
-            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/volcanoplot/volcanoplot/0.0.6",
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/volcanoplot/volcanoplot/0.0.7",
             "tool_shed_repository": {
-                "changeset_revision": "2f557f6abbfb",
+                "changeset_revision": "5e08a1e22dbc",
                 "name": "volcanoplot",
                 "owner": "iuc",
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             },
-            "tool_state": "{\"fdr_col\": \"7\", \"header\": \"yes\", \"input\": {\"__class__\": \"ConnectedValue\"}, \"label_col\": \"13\", \"labels\": {\"label_select\": \"signif\", \"__current_case__\": 0, \"top_num\": \"10\"}, \"lfc_col\": \"3\", \"lfc_thresh\": {\"__class__\": \"ConnectedValue\"}, \"out_options\": {\"rscript_out\": false}, \"plot_options\": {\"boxes\": false, \"title\": null, \"xlab\": null, \"ylab\": null, \"xmin\": null, \"xmax\": null, \"ymax\": null, \"legend\": null, \"legend_labs\": \"Down,Not Sig,Up\"}, \"pval_col\": \"6\", \"signif_thresh\": {\"__class__\": \"ConnectedValue\"}, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
-            "tool_version": "0.0.6",
+            "tool_state": "{\"fdr_col\": \"7\", \"header\": \"yes\", \"input\": {\"__class__\": \"RuntimeValue\"}, \"label_col\": \"13\", \"labels\": {\"label_select\": \"signif\", \"__current_case__\": 0, \"top_num\": \"10\"}, \"lfc_col\": \"3\", \"lfc_thresh\": {\"__class__\": \"ConnectedValue\"}, \"out_options\": {\"rscript_out\": false}, \"plot_options\": {\"boxes\": false, \"title\": null, \"xlab\": null, \"ylab\": null, \"xmin\": null, \"xmax\": null, \"ymax\": null, \"legend\": null, \"legend_labs\": \"Down,Not Sig,Up\"}, \"pval_col\": \"6\", \"shape_col\": \"\", \"shape_or_facet\": null, \"signif_thresh\": {\"__class__\": \"ConnectedValue\"}, \"__page__\": 0, \"__rerun_remap_job_id__\": null}",
+            "tool_version": "0.0.7",
             "type": "tool",
             "uuid": "cb314a3d-0b05-4d45-a961-591d59b3852b",
             "when": null,
@@ -1131,4 +1131,4 @@
     ],
     "uuid": "15d188a7-b028-4cf7-bb5d-13858e1f6e78",
     "version": 15
-}
+}