How to build gatsby repo when packages have been updated

[herecydev]

Summary

Trying to upgrade ink in the gatsby repo. I have run gatsby-dev --packages gatsby-cli and that is pulling across my local gatsby repo fine and any changes are synced correctly. However any packages that are upgraded are not being reflected correctly.

gatsby-dev seems to understand these have changed: "'ink' changed version from ^2.7.1 to ^3.0.4". But the ink package in node_modules isn't updated and is still left at an older version.

What am I doing wrong here?

Relevant information

[LekoArts]

cc @pieh