MAWS_2025/pyproject.toml at main · gc-os-ai/MAWS_2025 · GitHub

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[build-system]
requires = ["setuptools>=69.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "maws"
version = "0.1.0.dev0"
description = "MAWS: residue-based chemistry, complex preparation, and OpenMM routines for aptamer workflows"
readme = "README.md"
requires-python = ">=3.10"
# To add names of authors into this.

# Runtime deps kept small; versions mirror your notes where sensible
dependencies = [
  "numpy",
  "openmm>=8.3.0,<8.4.0",
  "numba>=0.40.1",

]

[project.optional-dependencies]
dev = [
  "pytest>=8.0.0",
  "pytest-cov",
  "ruff>=0.12.0",
  "pre-commit",
]

[tool.setuptools]
include-package-data = true

[tool.setuptools.packages.find]
include = ["maws*"]

# Include root-level data via MANIFEST.in (below)
[tool.setuptools.package-data]
# if you later move data under maws/, switch to:
# maws = ["data/*.pdb", "data/*.sdf", "data/*.lib", "data/*.frcmod"]

[tool.ruff]
line-length = 88
target-version = "py310"
exclude = ["__pycache__", ".venv", "build", "dist", ".git"]

[tool.ruff.lint]
select = ["E", "F", "B", "I", "UP", "N", "C4"]
ignore = ["N803", "N806"]

[tool.ruff.format]
quote-style = "double"
indent-style = "space"
docstring-code-format = true

[tool.pytest.ini_options]
testpaths = ["tests"]
addopts = "-ra"