Improve test isolation and pytest integration (#68)

* Improve tests isolation

Signed-off-by: elronbandel <[email protected]>

* rewriting some huggingface tests to comply with new API

* fixing some issues in pre-commit for notebooks

* using default_output_to_bool for lora override test

---------

Signed-off-by: elronbandel <[email protected]>
Co-authored-by: Avinash Balakrishnan <[email protected]>

Author: elronbandel

docs/examples/notebooks/georgia_tech.ipynb

@@ -49,7 +49,7 @@
     "RichDocument.from_document_file(\"https://mellea.ai\")\n",
     "\n",
     "# Some UI niceness.\n",
-    "from IPython.display import HTML, display\n",
+    "from IPython.display import HTML, display  # noqa: E402\n",
     "\n",
     "\n",
     "def set_css():\n",

pyproject.toml

@@ -138,6 +138,7 @@ ignore = [
 #   "UP006",  # List vs list, etc
 #   "UP007",  # Option and Union
 #   "UP035",  # `typing.Set` is deprecated, use `set` instead"
+  "PD901",  # Avoid using the generic variable name `df` for DataFrames 
 ]
 
 [tool.ruff.lint.pydocstyle]
@@ -151,7 +152,7 @@ combine-as-imports = true
 split-on-trailing-comma = false
 
 [tool.codespell]
-ignore-words-list = 'mellea,hashi,noo,Asai,asai'
+ignore-words-list = 'mellea,hashi,noo,Asai,asai,nd'
 check-filenames = true
 check-hidden = false
 regex = "(?<![a-z])[a-z'`]+|[A-Z][a-z'`]*|[a-z]+'[a-z]*|[a-z]+(?=[_-])|[a-z]+(?=[A-Z])|\\d+"