get ruff passing

Author: vreuter

looptrace_loci_vis/points_parser.py

@@ -12,7 +12,7 @@
 from ._types import PathLike, QCFailReasons
 from .point_record import PointRecord
 
-Input = TypeVar("Input", contravariant=True)
+Input = TypeVar("Input", contravariant=True) # noqa: PLC0105
 I1 = TypeVar("I1")
 I2 = TypeVar("I2", bound=Sized)
 

looptrace_loci_vis/reader.py

@@ -55,7 +55,7 @@ def filename_extension(self) -> str:  # noqa: D102
     raises=dict(RuntimeError="If collection of QC statuses inferred from files doesn't make sense"),
     returns="A function to create layers from folder path, if folder path is parsable",
 )
-def get_reader(path: PathOrPaths) -> Optional[Reader]:  # noqa: D103
+def get_reader(path: PathOrPaths) -> Optional[Reader]:  # noqa: D103, C901, PLR0911, PLR0912
     if isinstance(path, str):
         path: Path = Path(path)  # type: ignore[no-redef]
     if not isinstance(path, Path):

pyproject.toml

@@ -102,6 +102,13 @@ strict_optional = true
 line-length = 100
 target-version = "py310"
 
+[tool.ruff.lint.per-file-ignores]
+"tests/*.py" = [
+    "INP001", # part of an implicit namespace package
+    "D103", # Missing docstring in public function
+    "ANN201", # Missing return type annotation for public function
+]
+
 [tool.ruff.lint]
 select = ["ALL"]
 ignore = [
@@ -113,6 +120,7 @@ ignore = [
     # Opinionated syntax
     "D203", # Ignore this to instead opt for class body or docstring to possibly start right away under class.
     "D213", # Ignore this to instead opt for summary part of docstring to be on first physical line.
+    "D401", # First line of docstring should be in imperative mood
     "TRY003", # Avoid specifying long messages outside the exception class
     "C408",  # Unnecessary `dict` call (rewrite as a literal)
     "EM",  # Exception must not use a (f-)string literal, assign to variable first