Merge branch 'main' into js/no-type-extraction

Author: asgerf

.github/copilot-instructions.md

@@ -0,0 +1,4 @@
+When reviewing code:
+* do not review changes in files with `.expected` extension (they are automatically ensured to be correct).
+* in `.ql` and `.qll` files, do not try to review the code itself as you don't understand the programming language
+  well enough to make comments in these languages. You can still check for typos or comment improvements.

.github/workflows/check-change-note.yml

@@ -16,7 +16,6 @@ on:
       - "shared/**/*.qll"
       - "!**/experimental/**"
       - "!ql/**"
-      - "!rust/**"
       - ".github/workflows/check-change-note.yml"
 
 jobs:

.github/workflows/check-overlay-annotations.yml

@@ -0,0 +1,23 @@
+name: Check overlay annotations
+
+on:
+  push:
+    branches:
+      - main
+      - 'rc/*'
+  pull_request:
+    branches:
+      - main
+      - 'rc/*'
+
+permissions:
+  contents: read
+
+jobs:
+  sync:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - name: Check overlay annotations
+        run: python config/add-overlay-annotations.py --check java
+

.github/workflows/ql-for-ql-dataset_measure.yml

@@ -53,7 +53,7 @@ jobs:
       - name: Create database
         run: |
           "${CODEQL}" database create \
-          --search-path "${{ github.workspace }}"
+          --search-path "${{ github.workspace }}" \
           --threads 4 \
             --language ql --source-root "${{ github.workspace }}/repo" \
             "${{ runner.temp }}/database"

.pre-commit-config.yaml

@@ -9,7 +9,7 @@ repos:
       - id: trailing-whitespace
         exclude: /test/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
       - id: end-of-file-fixer
-        exclude: /test/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
+        exclude: Cargo.lock$|/test/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
 
   - repo: https://github.com/pre-commit/mirrors-clang-format
     rev: v17.0.6