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glinglin
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Add R-hub workflow
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‎.github/workflows/build.yaml‎

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Original file line numberDiff line numberDiff line change
@@ -1,4 +1,4 @@
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on: [push, pull_request]
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on: [push, pull_request, workflow_dispatch]
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name: build
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@@ -20,22 +20,33 @@ jobs:
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- { os: macOS-latest, r: 'release' }
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- { os: windows-latest, r: 'release' }
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- { os: windows-latest, r: 'oldrel' }
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- { os: ubuntu-20.04, r: 'devel', http-user-agent: 'release' }
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- { os: ubuntu-20.04, r: 'release', release: true }
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- { os: ubuntu-20.04, r: 'oldrel-1' }
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- { os: ubuntu-20.04, r: 'oldrel-2' }
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- { os: ubuntu-20.04, r: 'oldrel-3' }
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- { os: ubuntu-20.04, r: 'oldrel-4' }
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- { os: ubuntu-22.04, r: 'devel', http-user-agent: 'release' }
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- { os: ubuntu-22.04, r: 'release', release: true }
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- { os: ubuntu-22.04, r: 'oldrel-1' }
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- { os: ubuntu-22.04, r: 'oldrel-2' }
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- { os: ubuntu-22.04, r: 'oldrel-3' }
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- { os: ubuntu-22.04, r: 'oldrel-4' }
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env:
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GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
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R_KEEP_PKG_SOURCE: yes
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steps:
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- uses: actions/checkout@v3
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- uses: actions/checkout@v4
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- uses: r-lib/actions/setup-pandoc@v2
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- name: Configure pak and setup-r action to use manylinux_2_28
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if: startsWith(matrix.config.os, 'ubuntu') && matrix.config.r != 'devel'
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run: |
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# Override PPM repo and do not autodetect the distro (setup-r action env var)
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echo "RSPM=https://p3m.dev/cran/__linux__/manylinux_2_28/latest" >> $GITHUB_ENV
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# Configure pak to use the same PPM repo when checking for the latest packages
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echo "PKG_CRAN_MIRROR=${RSPM}" >> $GITHUB_ENV
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# Disable automatic system requirements installation since it is unnecessary (pak env var)
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# Temporarily reenabled to build terra from source
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# echo "PKG_SYSREQS=FALSE" >> $GITHUB_ENV
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- uses: r-lib/actions/setup-r@v2
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with:
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r-version: ${{ matrix.config.r }}
@@ -44,10 +55,10 @@ jobs:
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- uses: r-lib/actions/setup-r-dependencies@v2
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with:
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# Temporarily install htmlwidgets >= 1.6.0 for tests
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# leaflet needs terra, which does not support R <= 4.0
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extra-packages: |
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any::rcmdcheck
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htmlwidgets?source
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leaflet=?ignore-before-r=4.1.0
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- uses: r-lib/actions/check-r-package@v2
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@@ -60,7 +71,7 @@ jobs:
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if: matrix.config.release
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uses: r-lib/actions/setup-r-dependencies@v2
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with:
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extra-packages: any::pkgdown, local::.
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extra-packages: local::., [email protected]
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- name: Build pkgdown site
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if: matrix.config.release
@@ -79,9 +90,20 @@ jobs:
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echo "NETLIFY_ALIAS=${version_alias}-${github_sha_short}" >> $GITHUB_ENV
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fi
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- name: Rebuild pkgdown site search index for GitHub Pages
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if: matrix.config.release && github.ref == 'refs/heads/main'
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run: Rscript pkgdown/build-search-gh.R
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- name: Deploy pkgdown site to GitHub Pages
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if: matrix.config.release && github.ref == 'refs/heads/main'
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uses: JamesIves/[email protected]
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with:
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branch: gh-pages
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folder: docs
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- name: Deploy pkgdown site to Netlify
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if: matrix.config.release
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uses: nwtgck/actions-netlify@v1.2
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uses: nwtgck/actions-netlify@v3.0
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with:
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publish-dir: './docs'
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github-token: ${{ secrets.GITHUB_TOKEN }}
@@ -92,26 +114,21 @@ jobs:
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env:
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NETLIFY_AUTH_TOKEN: ${{ secrets.NETLIFY_AUTH_TOKEN }}
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NETLIFY_SITE_ID: ${{ secrets.NETLIFY_SITE_ID }}
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timeout-minutes: 1
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- name: Deploy pkgdown site to GitHub Pages
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if: matrix.config.release && github.ref == 'refs/heads/main'
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uses: JamesIves/[email protected]
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with:
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branch: gh-pages
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folder: docs
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timeout-minutes: 5
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# Work around Netlify error of "Error: Unprocessable Entity" even though the deployment succeeds
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continue-on-error: true
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build-node:
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runs-on: ubuntu-latest
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name: Node.js
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steps:
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- uses: actions/checkout@v3
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- uses: actions/checkout@v4
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- uses: actions/setup-node@v3
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- uses: actions/setup-node@v4
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with:
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node-version: '16'
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node-version: '22'
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cache: 'npm'
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- name: Install dependencies
@@ -124,4 +141,4 @@ jobs:
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run: npm run lint
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- name: Upload coverage to Codecov
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uses: codecov/codecov-action@v3
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uses: codecov/codecov-action@v4

‎.github/workflows/rhub.yaml‎

Lines changed: 95 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,95 @@
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# R-hub's generic GitHub Actions workflow file. It's canonical location is at
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# https://github.com/r-hub/actions/blob/v1/workflows/rhub.yaml
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# You can update this file to a newer version using the rhub2 package:
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#
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# rhub::rhub_setup()
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#
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# It is unlikely that you need to modify this file manually.
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name: R-hub
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run-name: "${{ github.event.inputs.id }}: ${{ github.event.inputs.name || format('Manually run by {0}', github.triggering_actor) }}"
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on:
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workflow_dispatch:
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inputs:
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config:
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description: 'A comma separated list of R-hub platforms to use.'
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type: string
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default: 'linux,windows,macos'
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name:
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description: 'Run name. You can leave this empty now.'
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type: string
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id:
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description: 'Unique ID. You can leave this empty now.'
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type: string
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jobs:
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setup:
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runs-on: ubuntu-latest
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outputs:
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containers: ${{ steps.rhub-setup.outputs.containers }}
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platforms: ${{ steps.rhub-setup.outputs.platforms }}
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steps:
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# NO NEED TO CHECKOUT HERE
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- uses: r-hub/actions/setup@v1
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with:
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config: ${{ github.event.inputs.config }}
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id: rhub-setup
40+
41+
linux-containers:
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needs: setup
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if: ${{ needs.setup.outputs.containers != '[]' }}
44+
runs-on: ubuntu-latest
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name: ${{ matrix.config.label }}
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strategy:
47+
fail-fast: false
48+
matrix:
49+
config: ${{ fromJson(needs.setup.outputs.containers) }}
50+
container:
51+
image: ${{ matrix.config.container }}
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53+
steps:
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- uses: r-hub/actions/checkout@v1
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- uses: r-hub/actions/platform-info@v1
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with:
57+
token: ${{ secrets.RHUB_TOKEN }}
58+
job-config: ${{ matrix.config.job-config }}
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- uses: r-hub/actions/setup-deps@v1
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with:
61+
token: ${{ secrets.RHUB_TOKEN }}
62+
job-config: ${{ matrix.config.job-config }}
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- uses: r-hub/actions/run-check@v1
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with:
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token: ${{ secrets.RHUB_TOKEN }}
66+
job-config: ${{ matrix.config.job-config }}
67+
68+
other-platforms:
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needs: setup
70+
if: ${{ needs.setup.outputs.platforms != '[]' }}
71+
runs-on: ${{ matrix.config.os }}
72+
name: ${{ matrix.config.label }}
73+
strategy:
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fail-fast: false
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matrix:
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config: ${{ fromJson(needs.setup.outputs.platforms) }}
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steps:
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- uses: r-hub/actions/checkout@v1
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- uses: r-hub/actions/setup-r@v1
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with:
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job-config: ${{ matrix.config.job-config }}
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token: ${{ secrets.RHUB_TOKEN }}
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- uses: r-hub/actions/platform-info@v1
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with:
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token: ${{ secrets.RHUB_TOKEN }}
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job-config: ${{ matrix.config.job-config }}
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- uses: r-hub/actions/setup-deps@v1
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with:
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job-config: ${{ matrix.config.job-config }}
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token: ${{ secrets.RHUB_TOKEN }}
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- uses: r-hub/actions/run-check@v1
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with:
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job-config: ${{ matrix.config.job-config }}
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token: ${{ secrets.RHUB_TOKEN }}

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