Skip to content

Commit 5b14d7d

Browse files
committed
update online manual and matlab toolbox
1 parent 510c1a7 commit 5b14d7d

29 files changed

+111
-100
lines changed

docs/copying.html

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
44
<head>
55
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
6-
<meta name="date" content="2024-05-07"/>
6+
<meta name="date" content="2024-05-13"/>
77
<meta name="generator" content="generate_html 0.3.3" />
88
<meta name="author" content="Andrew Penn" />
99
<meta name="description" content="A package for statistical analysis using resampling methods." />

docs/description.json

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1,14 +1,14 @@
11
{
22
"generator": "generate_html",
33
"generator_version": "0.3.3",
4-
"date_generated": "2024-05-07",
4+
"date_generated": "2024-05-13",
55
"package":
66
{
77
"name": "statistics-resampling",
8-
"version": "5.5.10",
8+
"version": "5.5.11",
99
"description": "The statistics-resampling package is an Octave package and Matlab toolbox that can be used to perform a wide variety of statistics tasks using non-parametric resampling methods. In particular, the functions included can be used to estimate bias, uncertainty (standard errors and confidence intervals), prediction error, and calculate p-values for null hypothesis significance tests. Variations of the resampling methods are included that improve the accuracy of the statistics for small samples and samples with complex dependence structures.",
1010
"shortdescription": "The statistics-resampling package is an Octave package and Matlab toolbox that can be used to perform a wide variety of statistics tasks using non-parametric resampling methods",
11-
"date": "2024-04-27",
11+
"date": "2024-05-13",
1212
"title": "A statistics package with a variety of resampling tools",
1313
"author": "Andrew Penn <andy.c.penn@gmail.com>",
1414
"maintainer": "Andrew Penn <andy.c.penn@gmail.com>",

docs/function/boot.html

Lines changed: 13 additions & 13 deletions
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
44
<head>
55
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
6-
<meta name="date" content="2024-05-07"/>
6+
<meta name="date" content="2024-05-13"/>
77
<meta name="generator" content="generate_html 0.3.3" />
88
<meta name="author" content="Andrew Penn" />
99
<meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -118,15 +118,15 @@ <h3><a name="1">Demonstration 1</a></h3>
118118

119119
Columns 1 through 13:
120120

121-
1 2 1 1 3 3 3 2 1 3 1 2 3
122-
2 1 3 1 3 2 3 3 3 2 3 2 2
123-
2 2 1 2 2 2 2 1 1 3 1 3 1
121+
2 3 3 2 2 2 1 1 3 1 3 3 2
122+
3 1 3 1 2 3 2 2 2 1 2 1 2
123+
2 1 3 3 2 1 2 3 1 2 1 2 3
124124

125125
Columns 14 through 20:
126126

127-
2 1 3 2 3 1 2
128-
2 2 1 3 1 1 2
129-
1 3 1 3 3 3 1</pre>
127+
1 2 2 3 3 1 1
128+
2 3 3 1 1 3 3
129+
1 1 1 2 3 3 1</pre>
130130
</div>
131131

132132
<h3><a name="2">Demonstration 2</a></h3>
@@ -141,15 +141,15 @@ <h3><a name="2">Demonstration 2</a></h3>
141141

142142
Columns 1 through 13:
143143

144-
2 3 2 3 3 1 2 1 1 2 3 2 3
145-
3 3 2 3 3 2 2 1 1 2 1 2 2
146-
2 3 1 2 3 2 3 1 1 3 3 2 3
144+
2 3 2 2 3 1 3 1 2 2 1 2 2
145+
2 1 1 2 3 2 2 1 1 3 3 1 3
146+
3 3 1 2 3 1 3 1 2 2 3 2 3
147147

148148
Columns 14 through 20:
149149

150-
3 2 2 1 1 1 3
151-
1 1 3 1 2 2 3
152-
1 1 2 1 1 1 3</pre>
150+
3 1 2 1 2 3 3
151+
3 1 2 1 1 1 2
152+
1 1 3 3 1 3 2</pre>
153153
</div>
154154

155155
<h3><a name="3">Demonstration 3</a></h3>

docs/function/boot1way.html

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
44
<head>
55
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
6-
<meta name="date" content="2024-05-07"/>
6+
<meta name="date" content="2024-05-13"/>
77
<meta name="generator" content="generate_html 0.3.3" />
88
<meta name="author" content="Andrew Penn" />
99
<meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -529,7 +529,7 @@ <h3><a name="7">Demonstration 7</a></h3>
529529
-----------------------------------------------------------------------------
530530
| Comparison | Test # | Ref # | Difference | t | p |
531531
|------------|------------|------------|------------|------------|----------|
532-
| 1 | 2 | 1 | -0.1147 | -0.26 | .760 |
532+
| 1 | 2 | 1 | -0.3684 | -0.63 | .564 |
533533

534534
-----------------------------------------------------------------------------
535535
| GROUP # | GROUP label | N |
@@ -574,7 +574,7 @@ <h3><a name="8">Demonstration 8</a></h3>
574574
-----------------------------------------------------------------------------
575575
| Comparison | Test # | Ref # | Difference | t | p |
576576
|------------|------------|------------|------------|------------|----------|
577-
| 1 | 2 | 1 | +1.340 | +2.51 | .019 |*
577+
| 1 | 2 | 1 | +0.3039 | +0.44 | .600 |
578578

579579
-----------------------------------------------------------------------------
580580
| GROUP # | GROUP label | N |

docs/function/bootbayes.html

Lines changed: 4 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
44
<head>
55
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
6-
<meta name="date" content="2024-05-07"/>
6+
<meta name="date" content="2024-05-13"/>
77
<meta name="generator" content="generate_html 0.3.3" />
88
<meta name="author" content="Andrew Penn" />
99
<meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -191,7 +191,7 @@ <h3><a name="1">Demonstration 1</a></h3>
191191

192192
Posterior Statistics:
193193
original bias median stdev CI_lower CI_upper
194-
+184.5 +0.04987 +184.5 1.286 +182.1 +187.1</pre>
194+
+184.5 +0.01529 +184.5 1.351 +181.7 +187.2</pre>
195195
</div>
196196

197197
<h3><a name="2">Demonstration 2</a></h3>
@@ -228,8 +228,8 @@ <h3><a name="2">Demonstration 2</a></h3>
228228

229229
Posterior Statistics:
230230
original bias median stdev CI_lower CI_upper
231-
+175.5 -0.1213 +175.3 2.401 +171.0 +180.2
232-
+0.1904 +0.003674 +0.1961 0.07964 +0.03563 +0.3449</pre>
231+
+175.5 -0.07775 +175.4 2.287 +171.1 +179.9
232+
+0.1904 +0.002169 +0.1929 0.07622 +0.03454 +0.3340</pre>
233233
</div>
234234

235235
<p>Package: <a href="../index.html">statistics-resampling</a></p>

docs/function/bootcdf.html

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
44
<head>
55
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
6-
<meta name="date" content="2024-05-07"/>
6+
<meta name="date" content="2024-05-13"/>
77
<meta name="generator" content="generate_html 0.3.3" />
88
<meta name="author" content="Andrew Penn" />
99
<meta name="description" content="A package for statistical analysis using resampling methods." />

docs/function/bootci.html

Lines changed: 16 additions & 16 deletions
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
44
<head>
55
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
6-
<meta name="date" content="2024-05-07"/>
6+
<meta name="date" content="2024-05-13"/>
77
<meta name="generator" content="generate_html 0.3.3" />
88
<meta name="author" content="Andrew Penn" />
99
<meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -269,8 +269,8 @@ <h3><a name="5">Demonstration 5</a></h3>
269269
<p>Produces the following output</p>
270270
<pre class="example">ci =
271271

272-
114.34
273-
257.98</pre>
272+
114.49
273+
258.48</pre>
274274
</div>
275275

276276
<h3><a name="6">Demonstration 6</a></h3>
@@ -333,8 +333,8 @@ <h3><a name="8">Demonstration 8</a></h3>
333333
<p>Produces the following output</p>
334334
<pre class="example">ci =
335335

336-
0.50486
337-
0.8608</pre>
336+
0.50615
337+
0.86244</pre>
338338
</div>
339339

340340
<h3><a name="9">Demonstration 9</a></h3>
@@ -441,13 +441,13 @@ <h3><a name="9">Demonstration 9</a></h3>
441441
<p>Produces the following output</p>
442442
<pre class="example">ans =
443443

444-
-16.69 -20.563 -12.28
445-
-11.721 -15.162 -7.7424
446-
-8.0606 -11.43 -4.392
447-
0.10476 -0.079726 0.28251
448-
0.010336 -0.002213 0.023716
449-
0.06452 0.032564 0.095997
450-
0.0016638 0.00011273 0.0030787</pre>
444+
-16.69 -20.554 -12.276
445+
-11.721 -15.155 -7.7419
446+
-8.0606 -11.428 -4.3915
447+
0.10476 -0.079726 0.28245
448+
0.010336 -0.0022151 0.023716
449+
0.06452 0.032552 0.09599
450+
0.0016638 0.00011268 0.0030786</pre>
451451
</div>
452452

453453
<h3><a name="10">Demonstration 10</a></h3>
@@ -468,8 +468,8 @@ <h3><a name="10">Demonstration 10</a></h3>
468468
<p>Produces the following output</p>
469469
<pre class="example">ci =
470470

471-
-0.61473 -0.41387
472-
0.57767 0.869</pre>
471+
-0.13896 -0.72921
472+
0.7127 0.31607</pre>
473473
</div>
474474

475475
<h3><a name="11">Demonstration 11</a></h3>
@@ -595,9 +595,9 @@ <h3><a name="11">Demonstration 11</a></h3>
595595
% normal | 81.5% | 3.0% | 15.5% | 0.77 | 1.21 |
596596
% percentile | 81.5% | 0.9% | 17.6% | 0.76 | 0.91 |
597597
% basic | 81.1% | 2.5% | 16.4% | 0.78 | 1.09 |
598-
% BCa | 84.2% | 5.4% | 10.4% | 0.86 | 1.82 |
598+
% BCa | 83.9% | 5.2% | 10.9% | 0.83 | 1.84 |
599599
% bootstrap-t | 89.2% | 4.3% | 6.5% | 0.99 | 2.15 |
600-
% calibrated | 87.4% | 4.2% | 8.4% | 0.91 | 2.03 |
600+
% calibrated | 88.9% | 3.7% | 7.4% | 0.89 | 2.04 |
601601
% ---------------------|----------|--------|--------|--------|-------|
602602
% parametric - exact | 90.8% | 3.7% | 5.5% | 0.99 | 2.52 |</pre>
603603
<p>gives an example of how 'bootci' is used.</p>

docs/function/bootclust.html

Lines changed: 14 additions & 14 deletions
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
44
<head>
55
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
6-
<meta name="date" content="2024-05-07"/>
6+
<meta name="date" content="2024-05-13"/>
77
<meta name="generator" content="generate_html 0.3.3" />
88
<meta name="author" content="Andrew Penn" />
99
<meta name="description" content="A package for statistical analysis using resampling methods." />
@@ -223,7 +223,7 @@ <h3><a name="2">Demonstration 2</a></h3>
223223

224224
Bootstrap Statistics:
225225
original bias std_error CI_lower CI_upper
226-
+29.65 -0.02581 +2.950 +22.83 +36.03</pre>
226+
+29.65 -0.02581 +2.950 +22.84 +36.04</pre>
227227
</div>
228228

229229
<h3><a name="3">Demonstration 3</a></h3>
@@ -312,11 +312,11 @@ <h3><a name="5">Demonstration 5</a></h3>
312312
Number of resamples: 1999
313313
Number of data rows in each block: 1
314314
Confidence interval (CI) type: Bias-corrected and accelerated (BCa)
315-
Nominal coverage (and the percentiles used): 90% (11.6%, 98.6%)
315+
Nominal coverage (and the percentiles used): 90% (11.7%, 98.6%)
316316

317317
Bootstrap Statistics:
318318
original bias std_error CI_lower CI_upper
319-
+171.5 -6.634 +42.13 +113.9 +258.2</pre>
319+
+171.5 -6.634 +42.13 +114.1 +258.7</pre>
320320
</div>
321321

322322
<h3><a name="6">Demonstration 6</a></h3>
@@ -343,11 +343,11 @@ <h3><a name="6">Demonstration 6</a></h3>
343343
Resampling method: Balanced, cluster bootstrap resampling
344344
Number of resamples: 1999
345345
Confidence interval (CI) type: Bias-corrected and accelerated (BCa)
346-
Nominal coverage (and the percentiles used): 90% (14.7%, 99.0%)
346+
Nominal coverage (and the percentiles used): 90% (15.1%, 99.1%)
347347

348348
Bootstrap Statistics:
349349
original bias std_error CI_lower CI_upper
350-
+171.5 -10.30 +34.38 +124.4 +234.5</pre>
350+
+171.5 -10.30 +34.38 +125.0 +235.8</pre>
351351
</div>
352352

353353
<h3><a name="7">Demonstration 7</a></h3>
@@ -376,8 +376,8 @@ <h3><a name="7">Demonstration 7</a></h3>
376376

377377
Bootstrap Statistics:
378378
original bias std_error CI_lower CI_upper
379-
+0.1347 -0.0002717 +0.2395 -0.2643 +0.5321
380-
-0.02530 -0.01070 +0.1898 -0.3179 +0.2850</pre>
379+
+0.3052 -0.01557 +0.2059 -0.007480 +0.6725
380+
-0.1663 +0.02261 +0.1710 -0.4057 +0.1247</pre>
381381
</div>
382382

383383
<h3><a name="8">Demonstration 8</a></h3>
@@ -406,8 +406,8 @@ <h3><a name="8">Demonstration 8</a></h3>
406406

407407
Bootstrap Statistics:
408408
original bias std_error CI_lower CI_upper
409-
+0.2430 +0.006715 +0.3419 -0.2821 +0.8430
410-
+0.6460 -0.05234 +0.2541 +0.3552 +1.233</pre>
409+
+0.1401 +0.006113 +0.2929 -0.4786 +0.5297
410+
+0.04985 +0.009865 +0.1333 -0.1655 +0.2615</pre>
411411
</div>
412412

413413
<h3><a name="9">Demonstration 9</a></h3>
@@ -434,11 +434,11 @@ <h3><a name="9">Demonstration 9</a></h3>
434434
Resampling method: Balanced, cluster bootstrap resampling
435435
Number of resamples: 1999
436436
Confidence interval (CI) type: Bias-corrected and accelerated (BCa)
437-
Nominal coverage (and the percentiles used): 95% (1.9%, 96.9%)
437+
Nominal coverage (and the percentiles used): 95% (2.8%, 97.8%)
438438

439439
Bootstrap Statistics:
440440
original bias std_error CI_lower CI_upper
441-
+0.7764 -0.02442 +0.1446 +0.3970 +0.9968</pre>
441+
+0.7764 -0.02442 +0.1446 +0.4355 +1.014</pre>
442442
</div>
443443

444444
<h3><a name="10">Demonstration 10</a></h3>
@@ -481,11 +481,11 @@ <h3><a name="10">Demonstration 10</a></h3>
481481
Number of resamples: 1999
482482
Number of data rows in each block: 3
483483
Confidence interval (CI) type: Bias-corrected and accelerated (BCa)
484-
Nominal coverage (and the percentiles used): 95% (73.4%, 100.0%)
484+
Nominal coverage (and the percentiles used): 95% (73.8%, 100.0%)
485485

486486
Bootstrap Statistics:
487487
original bias std_error CI_lower CI_upper
488-
+0.5858 -0.1686 +0.1319 +0.5009 +0.8686</pre>
488+
+0.5858 -0.1686 +0.1319 +0.5024 +0.8876</pre>
489489
</div>
490490

491491
<p>Package: <a href="../index.html">statistics-resampling</a></p>

docs/function/bootint.html

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
33
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
44
<head>
55
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
6-
<meta name="date" content="2024-05-07"/>
6+
<meta name="date" content="2024-05-13"/>
77
<meta name="generator" content="generate_html 0.3.3" />
88
<meta name="author" content="Andrew Penn" />
99
<meta name="description" content="A package for statistical analysis using resampling methods." />

0 commit comments

Comments
 (0)