Build failing on fork of a generated repo

[MartinKjunior]

Checks

• I have searched the docs, existing issues, and existing discussions for answers first.

Link to your website repo

https://github.com/MartinKjunior/nimo-website

Version of Lab Website Template you are using

1.3.5

Description

I can't get github actions to build the page. The error says Jekyll dependencies are missing, but I thought they are included in Gemfile? The original website is up and running and I don't want to push changes if my forked version is failing. Any help?
Error:

Run actions/jekyll-build-pages@v1
/usr/bin/docker run --name ghcrioactionsjekyllbuildpagesv1013_daa5eb --label 5eb7bb --workdir /github/workspace --rm -e "INPUT_SOURCE" -e "INPUT_DESTINATION" -e "INPUT_FUTURE" -e "INPUT_BUILD_REVISION" -e "INPUT_VERBOSE" -e "INPUT_TOKEN" -e "HOME" -e "GITHUB_JOB" -e "GITHUB_REF" -e "GITHUB_SHA" -e "GITHUB_REPOSITORY" -e "GITHUB_REPOSITORY_OWNER" -e "GITHUB_REPOSITORY_OWNER_ID" -e "GITHUB_RUN_ID" -e "GITHUB_RUN_NUMBER" -e "GITHUB_RETENTION_DAYS" -e "GITHUB_RUN_ATTEMPT" -e "GITHUB_ACTOR_ID" -e "GITHUB_ACTOR" -e "GITHUB_WORKFLOW" -e "GITHUB_HEAD_REF" -e "GITHUB_BASE_REF" -e "GITHUB_EVENT_NAME" -e "GITHUB_SERVER_URL" -e "GITHUB_API_URL" -e "GITHUB_GRAPHQL_URL" -e "GITHUB_REF_NAME" -e "GITHUB_REF_PROTECTED" -e "GITHUB_REF_TYPE" -e "GITHUB_WORKFLOW_REF" -e "GITHUB_WORKFLOW_SHA" -e "GITHUB_REPOSITORY_ID" -e "GITHUB_TRIGGERING_ACTOR" -e "GITHUB_WORKSPACE" -e "GITHUB_ACTION" -e "GITHUB_EVENT_PATH" -e "GITHUB_ACTION_REPOSITORY" -e "GITHUB_ACTION_REF" -e "GITHUB_PATH" -e "GITHUB_ENV" -e "GITHUB_STEP_SUMMARY" -e "GITHUB_STATE" -e "GITHUB_OUTPUT" -e "RUNNER_OS" -e "RUNNER_ARCH" -e "RUNNER_NAME" -e "RUNNER_ENVIRONMENT" -e "RUNNER_TOOL_CACHE" -e "RUNNER_TEMP" -e "RUNNER_WORKSPACE" -e "ACTIONS_RUNTIME_URL" -e "ACTIONS_RUNTIME_TOKEN" -e "ACTIONS_CACHE_URL" -e "ACTIONS_ID_TOKEN_REQUEST_URL" -e "ACTIONS_ID_TOKEN_REQUEST_TOKEN" -e "ACTIONS_RESULTS_URL" -e GITHUB_ACTIONS=true -e CI=true -v "/var/run/docker.sock":"/var/run/docker.sock" -v "/home/runner/work/_temp/_github_home":"/github/home" -v "/home/runner/work/_temp/_github_workflow":"/github/workflow" -v "/home/runner/work/_temp/_runner_file_commands":"/github/file_commands" -v "/home/runner/work/nimo-website/nimo-website":"/github/workspace" ghcr.io/actions/jekyll-build-pages:v1.0.13
The following gems are missing
 * jekyll (4.3.2)
 * html-proofer (5.0.8)
 * jekyll-spaceship (0.10.2)
 * jekyll-last-modified-at (1.3.0)
 * addressable (2.8.1)
 * i18n (1.12.0)
 * jekyll-sass-converter (3.0.0)
 * mercenary (0.4.0)
 * terminal-table (3.0.2)
 * async (2.8.1)
 * nokogiri (1.13.10)
 * pdf-reader (2.12.0)
 * rainbow (3.1.1)
 * yell (2.2.2)
 * zeitwerk (2.6.13)
 * gemoji (3.0.1)
 * posix-spawn (0.3.15)
 * public_suffix (5.0.1)
 * concurrent-ruby (1.2.2)
 * sass-embedded (1.58.3)
 * listen (3.8.0)
 * rexml (3.2.5)
 * unicode-display_width (2.4.2)
 * console (1.23.4)
 * fiber-annotation (0.2.0)
 * io-event (1.4.4)
 * timers (4.3.5)
 * mini_portile2 (2.8.1)
 * racc (1.6.2)
 * Ascii85 (1.1.0)
 * afm (0.2.2)
 * hashery (2.1.2)
 * ruby-rc4 (0.1.5)
 * ttfunk (1.7.0)
 * google-protobuf (3.22.0)
 * rb-inotify (0.10.1)
 * fiber-local (1.0.0)
 * ffi (1.15.5)
Install missing gems with `bundle install`
Warning: The github-pages gem can't satisfy your Gemfile's dependencies. If you want to use a different Jekyll version or need additional dependencies, consider building Jekyll site with GitHub Actions: https://jekyllrb.com/docs/continuous-integration/github-actions/
To use retry middleware with Faraday v2.0+, install `faraday-retry` gem
  Liquid Exception: Liquid syntax error (/github/workspace/_includes/head.html line 22): Expected end_of_string but found id included in /_layouts/default.html
/usr/local/bundle/gems/liquid-4.0.4/lib/liquid/parser.rb:16:in `consume': Liquid syntax error (/github/workspace/_includes/head.html line 22): Expected end_of_string but found id included  (Liquid::SyntaxError)
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/filters.rb:36[9](https://github.com/MartinKjunior/nimo-website/actions/runs/15854579602/job/44696535534#step:4:10):in `parse_condition'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/filters.rb:200:in `where_exp'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/strainer.rb:56:in `invoke'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/context.rb:86:in `invoke'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/variable.rb:84:in `block in render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/variable.rb:82:in `each'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/variable.rb:82:in `inject'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/variable.rb:82:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/tags/assign.rb:26:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/block_body.rb:103:in `render_node_to_output'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/block_body.rb:91:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:206:in `block in render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:240:in `with_profiling'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:205:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:218:in `render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:30:in `block (2 levels) in render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:42:in `measure_bytes'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:29:in `block in render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:49:in `measure_time'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:28:in `render!'
	from /usr/local/bundle/gems/jekyll-3.[10](https://github.com/MartinKjunior/nimo-website/actions/runs/15854579602/job/44696535534#step:4:11).0/lib/jekyll/tags/include.rb:140:in `block in render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/context.rb:123:in `stack'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/tags/include.rb:137:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/block_body.rb:103:in `render_node_to_output'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/block_body.rb:91:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:206:in `block in render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:240:in `with_profiling'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:205:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:218:in `render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:30:in `block (2 levels) in render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:42:in `measure_bytes'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:29:in `block in render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:49:in `measure_time'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:28:in `render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/tags/include.rb:140:in `block in render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/context.rb:123:in `stack'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/tags/include.rb:137:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/block_body.rb:103:in `render_node_to_output'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/block_body.rb:91:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:206:in `block in render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:240:in `with_profiling'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:205:in `render'
	from /usr/local/bundle/gems/liquid-4.0.4/lib/liquid/template.rb:218:in `render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:30:in `block (2 levels) in render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:42:in `measure_bytes'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:29:in `block in render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:49:in `measure_time'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/liquid_renderer/file.rb:28:in `render!'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/renderer.rb:126:in `render_liquid'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/renderer.rb:195:in `render_layout'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/renderer.rb:158:in `place_in_layouts'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/renderer.rb:88:in `render_document'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/renderer.rb:62:in `run'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/site.rb:479:in `render_regenerated'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/site.rb:464:in `block (2 levels) in render_docs'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/site.rb:463:in `each'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/site.rb:463:in `block in render_docs'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/site.rb:462:in `each_value'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/site.rb:462:in `render_docs'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/site.rb:191:in `render'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/site.rb:71:in `process'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/command.rb:28:in `process_site'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/commands/build.rb:65:in `build'
	from /usr/local/bundle/gems/jekyll-3.10.0/lib/jekyll/commands/build.rb:36:in `process'
	from /usr/local/bundle/gems/github-pages-232/bin/github-pages:70:in `block (3 levels) in <top (required)>'
	from /usr/local/bundle/gems/mercenary-0.3.6/lib/mercenary/command.rb:220:in `block in execute'
	from /usr/local/bundle/gems/mercenary-0.3.6/lib/mercenary/command.rb:220:in `each'
	from /usr/local/bundle/gems/mercenary-0.3.6/lib/mercenary/command.rb:220:in `execute'
	from /usr/local/bundle/gems/mercenary-0.3.6/lib/mercenary/program.rb:42:in `go'
	from /usr/local/bundle/gems/mercenary-0.3.6/lib/mercenary.rb:19:in `program'
	from /usr/local/bundle/gems/github-pages-232/bin/github-pages:6:in `<top (required)>'
	from /usr/local/bundle/bin/github-pages:25:in `load'
	from /usr/local/bundle/bin/github-pages:25:in `<main>'
Error:  Logging at level: debug Configuration file: /github/workspace/./_config.yaml GitHub Pages: github-pages v232 GitHub Pages: jekyll v3.10.0 Requiring: jekyll-sitemap Requiring: jekyll-redirect-from Requiring: jekyll-feed Requiring: jekyll-coffeescript Requiring: jekyll-commonmark-ghpages Requiring: jekyll-gist Requiring: jekyll-github-metadata Requiring: jekyll-paginate Requiring: jekyll-relative-links Requiring: jekyll-optional-front-matter Requiring: jekyll-readme-index Requiring: jekyll-default-layout Requiring: jekyll-titles-from-headings GitHub Metadata: Initializing... Source: /github/workspace/. Destination: /github/workspace/./_site Incremental build: disabled. Enable with --incremental Generating... EntryFilter: excluded /README.md EntryFilter: excluded /CITATION.cff EntryFilter: excluded /LICENSE.md Reading: _posts/2019-01-07-example-post-1.md Reading: _posts/2021-09-30-example-post-2.md Reading: _posts/2023-02-23-example-post-3.md Reading: _members/annet-nakkazi.md Reading: _members/ben-dickie.md Reading: _members/ben-leverton.md Reading: _members/caroline-lea-carnall.md Reading: _members/juan-sebastian-bermudez-paz.md Reading: _members/laura-parkes.md Reading: _members/paulina-villasenor.md Reading: _members/ross-little.md Reading: _members/will-morrey.md Generating: JekyllRedirectFrom::Generator finished in 0.0[11](https://github.com/MartinKjunior/nimo-website/actions/runs/15854579602/job/44696535534#step:4:12)269389 seconds. Generating: JekyllOptionalFrontMatter::Generator finished in 3.4294e-05 seconds. Generating: JekyllReadmeIndex::Generator finished in 6.7386e-05 seconds. Generating: Jekyll::JekyllSitemap finished in 0.000425[16](https://github.com/MartinKjunior/nimo-website/actions/runs/15854579602/job/44696535534#step:4:17)6 seconds. Jekyll Feed: Generating feed for posts Generating: JekyllFeed::Generator finished in 0.000683459 seconds. Generating: Jekyll::Paginate::Pagination finished in 5.67e-06 seconds. Generating: JekyllRelativeLinks::Generator finished in 7.2846e-05 seconds. Generating: JekyllDefaultLayout::Generator finished in 0.000[19](https://github.com/MartinKjunior/nimo-website/actions/runs/15854579602/job/44696535534#step:4:20)6277 seconds. Requiring: kramdown-parser-gfm Generating: JekyllTitlesFromHeadings::Generator finished in 0.007330642 seconds. Rendering: _posts/[20](https://github.com/MartinKjunior/nimo-website/actions/runs/15854579602/job/44696535534#step:4:21)19-01-07-example-post-1.md Pre-Render Hooks: _posts/2019-01-07-example-post-1.md Rendering Markup: _posts/2019-01-07-example-post-1.md Rendering Layout: _posts/2019-01-07-example-post-1.md Layout source: site GitHub Metadata: Generating for MartinKjunior/nimo-website GitHub Metadata: Calling @client.pages("MartinKjunior/nimo-website", {}) github-pages 232 | Error: Liquid syntax error (/github/workspace/_includes/head.html line [22](https://github.com/MartinKjunior/nimo-website/actions/runs/15854579602/job/44696535534#step:4:23)): Expected end_of_string but found id included

[MartinKjunior]

Might be because it's trying to deploy to an existing URL? I've removed the gh-pages branch for now, but I still don't get why the error is about Jekyll.

[vincerubinetti]

I'm looking through your workflow run failures.

The first failure I see is the one you mention above, with actions/jekyll-build-pages@v1. That action is not a part of the template and should never be run. It was run in your case because that is GitHub's built-in (and much more limited) Jekyll building mechanism -- which the template is not designed for -- and you hadn't run the first-time-setup workflow first, which disables this built-in behavior by adding the .nojekyll file.

The next failure I see is in first-time-setup workflow in the "Rename files" step: mv: cannot stat '.github/user_pull_request_template.md': No such file or directory. It seems that file had already been deleted at that point in time, how or why I can't tell... Did you run first-time-setup a few days ago and then delete the workflow run?

The next failure I see is this pages-build-deployment one where just the "deploy" job fails, but that is also due to the "build" job using the aforementioned actions/upload-pages-artifact.

The last error I'm seeing is in the on-pages workflow: Get Pages site failed. Please verify that the repository has Pages enabled and configured to build using GitHub Actions, or consider exploring the enablement parameter for this action.. I'm guessing this is because you've since deleted your gh-pages branch and/or disabled GitHub Pages, which automatically triggered this workflow to run.

Now that your gh-pages branch is gone, I can't verify that the .nojekyll file was there and in the correct location. I also can't look at your repo settings to see if everything is correct. Please review the setup documentation and make sure you're following all the steps, in order:

https://greene-lab.gitbook.io/lab-website-template-docs/getting-started/set-up-your-site

The first-time-setup workflow isn't really intended to be run multiple times, but none of the steps should actually critically fail except for the mv one but you have .github/user_pull_request_template.md there currently so it should be fine.