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1 parent 30d81fb commit 1846a96Copy full SHA for 1846a96
README.md
@@ -46,7 +46,7 @@ mkdir all
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# check the file to find Tumor sample ID in the #CHROM header of VCF
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-gzcat $WORKING_BASE/final_results/annotated.expression.vcf.gz | less
+zcat $WORKING_BASE/final_results/annotated.expression.vcf.gz | less
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export PATIENT_ID="100-049-BG004667"
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bsub -Is -q general-interactive -G $GROUP -a "docker(griffithlab/pvactools:4.0.1)" /bin/bash
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