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README.md

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# Peptide Sequence Synthesis
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This project provides a robust, reproducible tool for generating large, high-quality reference peptide sets for neoantigen analysis and benchmarking with pVACtools (notably pVACbind).
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This project provides a robust, reproducible tool for generating large, high-quality reference peptide sets
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## Features
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- [PySimpleGUI](https://pysimplegui.readthedocs.io/)
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- [transformers](https://huggingface.co/docs/transformers/index)
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- [torch](https://pytorch.org/)
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- (Optional) [Biopython](https://biopython.org/) if you want to extend for peptide property analysis
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Install dependencies with:
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```bash
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git push -u origin main
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```
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## License
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[MIT License](LICENSE) or as specified by your lab.
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## Acknowledgements
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- [pVACtools](https://pvactools.readthedocs.io/)
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- [ProtGPT2](https://huggingface.co/nferruz/ProtGPT2)
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- [PySimpleGUI](https://pysimplegui.readthedocs.io/)
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*For questions or contributions, please open an issue or pull request on GitHub.*

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