We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
There was an error while loading. Please reload this page.
1 parent bf993aa commit 227765cCopy full SHA for 227765c
scripts/run_stats_modified.py
@@ -32,6 +32,6 @@ def run(cmd: str) -> None:
32
os.rename(bed_file, f'all_splicing_variants_{tag}.bed')
33
run(f'python3 /home/ec2-user/workspace/regtools/scripts/stats_wrapper.py {tag}')
34
run(f'Rscript --vanilla /home/ec2-user/workspace/regtools/scripts/filter_and_BH.R {tag}')
35
- run(f'aws s3 cp compare_junctions/ s3://regtools-results-unstranded/{cohort}/compare_junctions3/ --recursive)')
36
- os.chdir('..')
+ run(f'aws s3 cp compare_junctions/ s3://regtools-results-unstranded/{cohort}/compare_junctions3/ --recursive')
+ os.chdir('..')
37
shutil.rmtree(cohort)
0 commit comments