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1 parent 1a17a6e commit e6a3114Copy full SHA for e6a3114
scripts/stats_wrapper.py
@@ -39,7 +39,7 @@
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subprocess.run(f'Rscript --vanilla /home/ec2-user/workspace/regtools/scripts/compare_junctions_hist_v2.R {tag} {file}', shell=True, check=True)
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output_files = glob.glob("*_out.tsv")
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output_files.sort() # glob lacks reliable ordering, so impose your own if output order matters
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-with open(f'junction_pvalues_{tag}.tsv', 'wb') as outfile:
+with open(f'compare_junctions/hist/junction_pvalues_{tag}.tsv', 'wb') as outfile:
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for i, fname in enumerate(output_files):
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with open(fname, 'rb') as infile:
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if i != 0:
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