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version: 2
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jobs:
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py3test:
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working_directory: ~/atomate
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docker:
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- image: materialsvirtuallab/circle-ci-pmg-py3:3.7.3
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- image: circleci/mongo:3.4.15
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steps:
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- checkout
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- restore_cache:
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key: deps1-{{ .Branch }}-{{ checksum "requirements.txt" }}
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- run:
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command: |
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export PATH=$HOME/miniconda3/bin:$PATH
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conda create --quiet --yes --name test_env python=3.7
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source activate test_env
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conda install --quiet --yes numpy scipy matplotlib sympy pandas
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conda install --quiet --yes -c conda-forge openbabel
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# conda install --quiet --yes -c clinicalgraphics vtk
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conda install --quiet --yes -c conda-forge python-igraph
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conda update --quiet --all
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wget https://vampire.york.ac.uk/resources/release-5/vampire-5.0-linux.tar.gz
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tar -zxvf vampire-5.0-linux.tar.gz
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export PATH=/root/atomate/linux/:$PATH
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pip install --quiet -r requirements.txt -r requirements-ci.txt
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# Add executables and path.
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for EXEPATH in `pwd`/cmd_line/*/Linux_64bit; do export PATH=$PATH:$EXEPATH; done
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pip install --quiet -e .
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pytest --ignore=atomate/qchem/test_files --cov=atomate --cov-report html:coverage_reports atomate
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no_output_timeout: 3600
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- store_artifacts:
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path: coverage_reports/
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destination: tr1
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- store_test_results:
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path: coverage_reports/
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py3devtest:
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working_directory: ~/atomate
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docker:
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- image: materialsvirtuallab/circle-ci-pmg-py3:3.7.3
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- image: circleci/mongo:3.4.15
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steps:
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- checkout
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- restore_cache:
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key: deps1-{{ .Branch }}-{{ checksum "requirements.txt" }}
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- run:
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command: |
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export PATH=$HOME/miniconda3/bin:$PATH
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conda create --quiet --yes --name test_env python=3.7
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source activate test_env
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conda install --quiet --yes numpy scipy matplotlib sympy pandas
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conda install --quiet --yes -c conda-forge openbabel
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# conda install --quiet --yes -c clinicalgraphics vtk
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conda install --quiet --yes -c conda-forge python-igraph
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conda update --quiet --all
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wget https://vampire.york.ac.uk/resources/release-5/vampire-5.0-linux.tar.gz
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tar -zxvf vampire-5.0-linux.tar.gz
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export PATH=/root/atomate/linux/:$PATH
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pip install --quiet -r requirements.txt -r requirements-ci.txt
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pip install git+https://github.com/materialsproject/pymatgen.git --upgrade
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pip install git+https://github.com/materialsproject/custodian.git --upgrade
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pip install git+https://github.com/materialsproject/fireworks.git --upgrade
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# Add executables and path.
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for EXEPATH in `pwd`/cmd_line/*/Linux_64bit; do export PATH=$PATH:$EXEPATH; done
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pip install --quiet -e .
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pytest --ignore=atomate/qchem/test_files --cov=atomate --cov-report html:coverage_reports atomate
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no_output_timeout: 3600
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- store_artifacts:
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path: coverage_reports/
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destination: tr1
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- store_test_results:
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path: coverage_reports/
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workflows:
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version: 2
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build_and_test:
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jobs:
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- py3test
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- py3devtest:
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filters: # don't run dev tests on main branch
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branches:
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ignore:
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main
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FROM python:3.6.4
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RUN apt-get update && apt-get install -y gfortran python-openbabel python-vtk python3-tk
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RUN wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
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RUN bash Miniconda3-latest-Linux-x86_64.sh -b
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RUN export PATH=$HOME/miniconda3/bin:$PATH
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atomate/vasp/test_files/lobster/Lobsterinputs/lobster.out

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