actually let's not exclude files in docs_rst/

Author: janosh

.pre-commit-config.yaml

@@ -1,4 +1,4 @@
-exclude: ^(docs/|docs_rst/|.*test_files/|.*tests/).*$
+exclude: ^(docs/|.*test_files/|.*tests/)
 
 repos:
   - repo: https://github.com/myint/autoflake

docs_rst/_static/nature.css

@@ -258,4 +258,4 @@ p.caption {
     background-color: #eee;
     width: 65%;
     padding: 10px 10px;
-}
+}

docs_rst/_templates/layout.html

@@ -7,4 +7,4 @@
 
 {% block footer %}
 {{ super() }}
-{% endblock %}
+{% endblock %}

docs_rst/builders.rst

@@ -55,4 +55,4 @@ Running builders is simple. Note that running builders does not modify the sourc
 
 To try running builders, follow the example in ``atomate.vasp.builders.examples``. Afterwards, inspect your MongoDB database to find the new collections and data.
 
-Note that builders have a reset() function in case you want to start over.
+Note that builders have a reset() function in case you want to start over.

docs_rst/changelog.rst

@@ -366,4 +366,4 @@ atomate Changelog
 
 **v0.0.3**
 
-* initial release (A. Jain, S.P. Ong, K. Mathew, M. Aykol)
+* initial release (A. Jain, S.P. Ong, K. Mathew, M. Aykol)

docs_rst/concepts.rst

@@ -65,4 +65,4 @@ might come in handy when setting the NCORE parameter on NERSC machines:
 
 Thus, a good starting point is to set NCORE=4 for Matgen/Edison and NCORE=8 for
 Cori. Reduce NCORE if you want to try to increase speed at the risk of having
-lower memory available per orbital.
+lower memory available per orbital.

docs_rst/creating_workflows.rst

@@ -303,5 +303,3 @@ Understanding this guide has enabled you to create arbitrarily complex atomate w
 If any of this was unclear, or if you feel that useful documentation is missing, please leave us feedback on the `atomate Discourse forum`_! To see all of the different pieces you can control with Python, go to the :ref:`API documentation <modindex>`. Many customization options and features of interest are not in atomate alone, but in `FireWorks`_, `pymatgen`_, and `custodian`_. Mastering FireWorks will enable you to get the most out of executing and managing your workflows. Mastering pymatgen will help you write complex materials workflows and perform sophisticated analyses of results.
 
 .. _atomate Discourse forum:  https://discuss.matsci.org/c/atomate
-
-

docs_rst/customizing_workflows.rst

@@ -219,4 +219,3 @@ Which POTCAR file you want to use is controlled by the input set as well. The ea
 
 .. _pymatgen's vasp sets: http://pymatgen.org/pymatgen.io.vasp.sets.html
 .. _pymatgen.io.vasp.sets.MPHSERelaxSet: http://pymatgen.org/pymatgen.io.vasp.sets.html#pymatgen.io.vasp.sets.MPHSERelaxSet
-

docs_rst/developer_installation.rst

@@ -70,4 +70,4 @@ If you need to debug at a later point, this might be something to refer back to,
 Many tests have a DEBUG option that can sometimes help in finding problems.
 Sometimes you need to toggle DEBUG on/off a couple of times if you are doing this to make sure all the old data is actually cleared between debug runs.
 
-Run the tests by navigating to ``<<INSTALL_DIR>>/codes/atomate/`` and running ``python setup.py test`` or ``nosetests``.
+Run the tests by navigating to ``<<INSTALL_DIR>>/codes/atomate/`` and running ``python setup.py test`` or ``nosetests``.

docs_rst/gibbs_workflow_tutorial.rst

@@ -216,4 +216,3 @@ At this point, you might:
 
 * Explore using builders to generate metadata: :ref:`builders`.
 * Skip to learning how to create your own workflows that you can use and distribute: :ref:`creating workflows`.
-