update ci (#504)

* update `ci.yml`

* update `pyproject.toml`

Author: rvhonorato

.github/workflows/ci.yml

@@ -4,11 +4,10 @@ on: push
 
 jobs:
   build:
-    runs-on: ${{ matrix.platform }}
+    runs-on: ubuntu-latest
     strategy:
       matrix:
-        platform: [ubuntu-latest, macos-latest]
-        python-version: ["3.9", "3.10", "3.11", "3.12"]
+        python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
 
     steps:
       - uses: actions/checkout@v4

pyproject.toml

@@ -10,26 +10,30 @@ classifiers = [
   "Development Status :: 5 - Production/Stable",
   "License :: OSI Approved :: Apache Software License",
   "Programming Language :: Python :: 3.9",
+  "Programming Language :: Python :: 3.10",
+  "Programming Language :: Python :: 3.11",
+  "Programming Language :: Python :: 3.12",
+  "Programming Language :: Python :: 3.13",
   "Topic :: Scientific/Engineering :: Chemistry",
   "Topic :: Scientific/Engineering :: Bio-Informatics",
   "Intended Audience :: Science/Research",
 ]
 
 dependencies = [
-  "bio==1.6.2",
-  "lxml==5.4.0",
-  "mdanalysis==2.7.0",
-  "requests==2.32.4",
-  "biopython==1.85",
-  "scipy==1.13.1",
-  "matplotlib==3.9.4",
-  "pdb-tools==2.5.0",
-  "pandas==2.2.3",
-  "openpyxl==3.1.5",
-  "plotly==6.0.1",
-  "pdbecif==1.5",
-  "jsonpickle==4.1.0",
-  "kaleido==0.2.1",
+  "bio>=1.6.2",
+  "lxml>=5.4.0",
+  "mdanalysis>=2.7.0",
+  "requests>=2.32.4",
+  "biopython>=1.85",
+  "scipy>=1.13.1",
+  "matplotlib>=3.9.4",
+  "pdb-tools>=2.5.0",
+  "pandas>=2.2.3",
+  "openpyxl>=3.1.5",
+  "plotly>=6.0.1",
+  "pdbecif>=1.5",
+  "jsonpickle>=4.1.0",
+  "kaleido>=0.2.1",
 ]
 
 [project.optional-dependencies]