BPfold/pyproject.toml at master · heqin-zhu/BPfold · GitHub

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[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"

[project]
name = "BPfold"
dynamic = ["version"]
readme = "README.md"
authors = [
  { name="Heqin Zhu", email="zhuheqin1@gmail.com" },
]
description = "Deep generalizable prediction of RNA secondary structure via base pair motif energy."
requires-python = ">=3.8"
license = { file = "LICENSE" }
classifiers = [
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent",
]
dependencies = [
#    "numpy >= 1.24.3",
#    "fastai >= 2.7.12",
#    "einops >= 0.7.0",
#    "scikit-learn >= 1.3.0",
#    "torchmetrics >= 1.0.3",
#    "tqdm >= 4.66.1",
#    "pyyaml >= 6.0.1",
#    "scikit-image >= 0.21.0",
#    "scipy >= 1.10.1",
#    "torch >= 2.0.1",
]

keywords = ["RNA", "secondary structure", "fold"]

[project.urls]
Homepage = "https://github.com/heqin-zhu/BPfold"
Issues = "https://github.com/heqin-zhu/BPfold/issues"

[project.scripts]
BPfold = "BPfold.predict:main"
BPfold_eval = "BPfold.evaluate:main"
BPfold_kit = "BPfold.kit:main"

[tool.setuptools.packages.find]
where = ["src"]

[tool.setuptools.package-data]
"BPfold.configs" = ["*.yaml"]
"BPfold.paras" = ["key.energy"]

[tool.setuptools.dynamic]
version = {attr = "BPfold.__version__"}  # any module attribute compatible with ast.literal_eval