Update Modules [5 July 2025, 15:43]

Author: admin6

mkdocs/docs/HPC/only/gent/available_software/data/json_data.json

@@ -14,12 +14,13 @@ The overview below shows which ArchR installations are available per HPC-UGent T
 To start using ArchR, load one of these modules using a `module load` command like:
 
 ```shell
-module load ArchR/1.0.2-foss-2023a-R-4.3.2
+module load ArchR/1.0.3-foss-2023b-R-4.4.1
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|ArchR/1.0.3-foss-2023b-R-4.4.1|x|-|x|x|x|x|x|
 |ArchR/1.0.2-foss-2023a-R-4.3.2|-|x|-|x|-|x|x|
 |ArchR/1.0.2-20220704-foss-2023a-R-4.3.2|-|-|-|-|-|x|x|

mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json

@@ -14,11 +14,12 @@ The overview below shows which MACS2 installations are available per HPC-UGent T
 To start using MACS2, load one of these modules using a `module load` command like:
 
 ```shell
-module load MACS2/2.2.9.1-foss-2023a
+module load MACS2/2.2.9.1-foss-2023b
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|MACS2/2.2.9.1-foss-2023b|x|-|x|x|x|x|x|
 |MACS2/2.2.9.1-foss-2023a|x|x|x|x|x|x|x|

mkdocs/docs/HPC/only/gent/available_software/detail/ArchR.md

@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+Mono
+====
+
+# Available modules
+
+
+The overview below shows which Mono installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using Mono, load one of these modules using a `module load` command like:
+
+```shell
+module load Mono/6.12.0.199-GCCcore-13.3.0
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Mono/6.12.0.199-GCCcore-13.3.0|x|-|x|x|x|x|x|

mkdocs/docs/HPC/only/gent/available_software/detail/MACS2.md

@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+PeptideShaker
+=============
+
+# Available modules
+
+
+The overview below shows which PeptideShaker installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using PeptideShaker, load one of these modules using a `module load` command like:
+
+```shell
+module load PeptideShaker/3.0.11-Java-11
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|PeptideShaker/3.0.11-Java-11|x|x|x|x|x|x|x|

mkdocs/docs/HPC/only/gent/available_software/detail/Mono.md

@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+SearchGUI
+=========
+
+# Available modules
+
+
+The overview below shows which SearchGUI installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using SearchGUI, load one of these modules using a `module load` command like:
+
+```shell
+module load SearchGUI/4.3.9-GCCcore-13.3.0-Java-11
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|SearchGUI/4.3.9-GCCcore-13.3.0-Java-11|x|-|x|x|x|x|x|

mkdocs/docs/HPC/only/gent/available_software/detail/PeptideShaker.md

@@ -14,11 +14,12 @@ The overview below shows which chromVARmotifs installations are available per HP
 To start using chromVARmotifs, load one of these modules using a `module load` command like:
 
 ```shell
-module load chromVARmotifs/0.2.0-foss-2023a-R-4.3.2
+module load chromVARmotifs/0.2.0-foss-2023b-R-4.4.1
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|chromVARmotifs/0.2.0-foss-2023b-R-4.4.1|x|-|x|x|x|x|x|
 |chromVARmotifs/0.2.0-foss-2023a-R-4.3.2|x|x|-|x|-|x|x|

mkdocs/docs/HPC/only/gent/available_software/detail/SearchGUI.md

@@ -14,11 +14,12 @@ The overview below shows which presto installations are available per HPC-UGent
 To start using presto, load one of these modules using a `module load` command like:
 
 ```shell
-module load presto/1.0.0-20230501-foss-2023a-R-4.3.2
+module load presto/1.0.0-20230501-foss-2023b-R-4.4.1
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|presto/1.0.0-20230501-foss-2023b-R-4.4.1|x|-|x|x|x|x|x|
 |presto/1.0.0-20230501-foss-2023a-R-4.3.2|-|x|-|x|-|x|x|

mkdocs/docs/HPC/only/gent/available_software/detail/chromVARmotifs.md

@@ -16,7 +16,7 @@ hpcname: hpcugent
 loginnode: login.hpc.ugent.be
 loginhost: gligar09.gastly.os
 altloginhost: gligar10.gastly.os
-modules_last_updated: Wed, 02 Jul 2025 at 15:45:44 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
+modules_last_updated: Sat, 05 Jul 2025 at 15:45:39 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
 # get these with ssh-keyscan gligar01.ugent.be > file
 # ssh-keygen -l -f file
 # ssh-keygen -l -f file -E md5